Genome-Wide Identification and Functional Characterization of the Phosphate Transporter Gene Family in Sorghum

被引:29
|
作者
Wang, Jiahui [1 ]
Yang, Yang [1 ]
Liao, Lingzi [1 ]
Xu, Jiawei [1 ]
Liang, Xiao [1 ]
Liu, Wen [1 ]
机构
[1] China Three Gorges Univ, Coll Biol & Pharmaceut Sci, Key Lab Three Gorges Reg Plant Genet & Germplasm, Biotechnol Res Ctr, Yichang 443002, Peoples R China
基金
中国国家自然科学基金;
关键词
Sorghum; phosphate transporters; gene family; gene expression; low phosphate; EXPRESSION PROFILE; PHT1; FAMILY; ARABIDOPSIS; PLANT; ACQUISITION; HOMEOSTASIS; ROOT; MEMBERS;
D O I
10.3390/biom9110670
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The phosphate transporter (PHT) family mediates the uptake and translocation of the essential macronutrient phosphorus (P) in plants. In this study, 27 PHT proteins in Sorghum were identified via bioinformatics tools. Phylogenetic analysis of their protein sequences in comparison with those family proteins from Arabidopsis and rice indicated that these proteins could be clustered into five typical subfamilies. There are 12 SbPHT1 members, one SbPHT2, six SbPHT3s, six SbPHT4s, and two SbPHOs in Sorghum. Further analysis of the gene structure, conserved motifs, subcellular localization, and transmembrane domains suggested that these features are relatively conserved within each subfamily. Meanwhile, the qRT-PCR assay implied that SbPHT1;2, SbPHT1;11, and SbPHT4;6 were significantly upregulated in roots when exposed to low-phosphate conditions, suggesting that these genes might be involved in P uptake in low-phosphate conditions. Our study will increase our understanding of the roles of phosphate transporters in Sorghum.
引用
收藏
页数:14
相关论文
共 50 条
  • [1] Genome-Wide Identification, Expression, and Functional Analysis of the Sugar Transporter Gene Family in Cassava (Manihot esculenta)
    Liu, Qin
    Dang, Huijie
    Chen, Zhijian
    Wu, Junzheng
    Chen, Yinhua
    Chen, Songbi
    Luo, Lijuan
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2018, 19 (04)
  • [2] Genome-Wide Identification and Characterization of MYB-CC Gene Factor Family in Sorghum and Their Response to Phosphate Starvation
    M. Li
    X. Han
    H. Du
    Z. Mu
    Russian Journal of Plant Physiology, 2022, 69
  • [3] Genome-Wide Identification and Characterization of MYB-CC Gene Factor Family in Sorghum and Their Response to Phosphate Starvation
    Li, M.
    Han, X.
    Du, H.
    Mu, Z.
    RUSSIAN JOURNAL OF PLANT PHYSIOLOGY, 2022, 69 (06)
  • [4] Genome-wide identification and characterization of laccase gene family in Citrus sinensis
    Xu, Xiaoyong
    Zhou, Yipeng
    Wang, Bin
    Ding, Li
    Wang, Yue
    Luo, Li
    Zhang, Yueliang
    Kong, Weiwen
    GENE, 2019, 689 : 114 - 123
  • [5] Genome-wide identification and characterization of the TIFY gene family in kiwifruit
    Tao, Junjie
    Jia, Huimin
    Wu, Mengting
    Zhong, Wenqi
    Jia, Dongfeng
    Wang, Zupeng
    Huang, Chunhui
    BMC GENOMICS, 2022, 23 (01)
  • [6] Genome-Wide Identification, Expression Profiling, and Evolution of Phosphate Transporter Gene Family in Green Algae
    Wang, Long
    Xiao, Liang
    Yang, Haiyan
    Chen, Guanglei
    Zeng, Houqing
    Zhao, Hongyu
    Zhu, Yiyong
    FRONTIERS IN GENETICS, 2020, 11
  • [7] Genome-wide analysis of the phosphate transporter gene family in oats: insights into phosphorus and water deficiency responses
    Li, Jin
    Yang, Yanjiao
    Huang, Hualing
    Yu, Jing
    Zhou, Qingping
    Jia, Zhifeng
    Chen, Shiyong
    JOURNAL OF APPLIED GENETICS, 2025,
  • [8] Genome-wide identification of lipoxygenase gene family in cotton and functional characterization in response to abiotic stresses
    Shaban, Muhammad
    Ahmed, Muhammad Mahmood
    Sun, Heng
    Ullah, Abid
    Zhu, Longfu
    BMC GENOMICS, 2018, 19
  • [9] Genome-Wide Identification, Characterization, and Expression of the HAK/KUP/KT Potassium Transporter Gene Family in Poncirus trifoliata and Functional Analysis of PtKUP10 under Salt Stress
    Jin, Longfei
    Yin, Xinxing
    Wen, Mingxia
    Huang, Bei
    Liu, Feng
    Li, Xinguo
    Wang, Peng
    HORTICULTURAE, 2024, 10 (06)
  • [10] Genome-wide identification and characterization of the cyclin gene family in Populus trichocarpa
    Dong, Qing
    Zhao, Yang
    Jiang, Haiyang
    He, Hongsheng
    Zhu, Suwen
    Cheng, Beijiu
    Xiang, Yan
    PLANT CELL TISSUE AND ORGAN CULTURE, 2011, 107 (01) : 55 - 67