Cuproptosis scoring system to predict the clinical outcome and immune response in bladder cancer

被引:114
作者
Song, Qiang [1 ,2 ]
Zhou, Rui [1 ]
Shu, Fangpeng [1 ]
Fu, Wen [1 ]
机构
[1] Guangzhou Med Univ, Guangzhou Women & Childrens Med Ctr, Natl Childrens Med Ctr South Cent Reg, Dept Urol, Guangzhou, Peoples R China
[2] Nanjing Med Univ, Affiliated Hosp 1, Dept Urol, Nanjing, Peoples R China
来源
FRONTIERS IN IMMUNOLOGY | 2022年 / 13卷
关键词
bladder cancer; cuproptosis; prognosis; tumor microenvironment; immunotherapy; CELL-DEATH; COPPER;
D O I
10.3389/fimmu.2022.958368
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Cuproptosis is a novel copper ion-dependent cell death type being regulated in cells, and this is quite different from the common cell death patterns such as apoptosis, pyroptosis, necroptosis, and ferroptosis. Interestingly, like with death patterns, cuproptosis-related genes have recently been reported to regulate the occurrence and progression of various tumors. However, in bladder cancer, the link between cuproptosis and clinical outcome, tumor microenvironment (TME) modification, and immunotherapy is unknown. To determine the role of cuprotosis in the tumor microenvironment, we systematically examined the characteristic patterns of 10 cuproptosis-related genes in bladder cancer (BLCA). By analyzing principal component data, we established a cuproptosis score to determine the degree of cuproptosis among patients. Finally, we evaluated the potential of these values in predicting BLCA prognosis and treatment responses. A comprehensive study of the mutations of cuproptosis-related genes in BLCA specimens was conducted at the genetic level, and their expression and survival patterns were evaluated using The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Two cuproptosis patterns were constructed based on the transcription level of 10 cuproptosis-related genes, featuring differences in the prognosis and the infiltrating landscape of immune cells (especially T and dendritic cells) with interactions between cuproptosis and the TME. Our study further demonstrated that cuproptosis score may predict prognosis, immunophenotype sensitivity to chemotherapy, and immunotherapy response among bladder cancer patients. The development and progression of bladder cancer are likely to be influenced by cuproptosis, which may involve a diverse and complex TME. The cuproptosis pattern evaluated in our study may enhance understanding of immune infiltrations and guide more potent immunotherapy interventions.
引用
收藏
页数:16
相关论文
共 30 条
[1]   Signatures of mutational processes in human cancer [J].
Alexandrov, Ludmil B. ;
Nik-Zainal, Serena ;
Wedge, David C. ;
Aparicio, Samuel A. J. R. ;
Behjati, Sam ;
Biankin, Andrew V. ;
Bignell, Graham R. ;
Bolli, Niccolo ;
Borg, Ake ;
Borresen-Dale, Anne-Lise ;
Boyault, Sandrine ;
Burkhardt, Birgit ;
Butler, Adam P. ;
Caldas, Carlos ;
Davies, Helen R. ;
Desmedt, Christine ;
Eils, Roland ;
Eyfjord, Jorunn Erla ;
Foekens, John A. ;
Greaves, Mel ;
Hosoda, Fumie ;
Hutter, Barbara ;
Ilicic, Tomislav ;
Imbeaud, Sandrine ;
Imielinsk, Marcin ;
Jaeger, Natalie ;
Jones, David T. W. ;
Jones, David ;
Knappskog, Stian ;
Kool, Marcel ;
Lakhani, Sunil R. ;
Lopez-Otin, Carlos ;
Martin, Sancha ;
Munshi, Nikhil C. ;
Nakamura, Hiromi ;
Northcott, Paul A. ;
Pajic, Marina ;
Papaemmanuil, Elli ;
Paradiso, Angelo ;
Pearson, John V. ;
Puente, Xose S. ;
Raine, Keiran ;
Ramakrishna, Manasa ;
Richardson, Andrea L. ;
Richter, Julia ;
Rosenstiel, Philip ;
Schlesner, Matthias ;
Schumacher, Ton N. ;
Span, Paul N. ;
Teague, Jon W. .
NATURE, 2013, 500 (7463) :415-+
[2]   Genomic analysis uncovers prognostic and immunogenic characteristics of ferroptosis for clear cell renal cell carcinoma [J].
Bai, Dan ;
Feng, Huhu ;
Yang, Jiajun ;
Yin, Aiping ;
Lin, Xiao ;
Qian, Airong ;
Sugiyama, Hiroshi .
MOLECULAR THERAPY-NUCLEIC ACIDS, 2021, 25 :186-197
[3]   A Novel Cuproptosis-Related Prognostic Gene Signature and Validation of Differential Expression in Clear Cell Renal Cell Carcinoma [J].
Bian, Zilong ;
Fan, Rong ;
Xie, Lingmin .
GENES, 2022, 13 (05)
[4]  
Chen Xinlei, 2020, AUTOPHAGY, DOI DOI 10.1080/15548627.2020.1810918
[5]   The effects of some essential and toxic metals/metalloids in COVID-19: A review [J].
Domingo, Jose L. ;
Marques, Montse .
FOOD AND CHEMICAL TOXICOLOGY, 2021, 152
[6]   Copper-Induced Epigenetic Changes Shape the Clinical Phenotype in Wilson's Disease [J].
Fanni, Daniela ;
Gerosa, Clara ;
Nurchi, Valeria Marina ;
Cappai, Rosita ;
Mureddu, Marta ;
Van Eyken, Peter ;
Saba, Luca ;
Manchia, Mirko ;
Faa, Gavino .
CURRENT MEDICINAL CHEMISTRY, 2021, 28 (14) :2707-2716
[7]   Connecting copper and cancer: from transition metal signalling to metalloplasia [J].
Ge, Eva J. ;
Bush, Ashley I. ;
Casini, Angela ;
Cobine, Paul A. ;
Cross, Justin R. ;
DeNicola, Gina M. ;
Dou, Q. Ping ;
Franz, Katherine J. ;
Gohil, Vishal M. ;
Gupta, Sanjeev ;
Kaler, Stephen G. ;
Lutsenko, Svetlana ;
Mittal, Vivek ;
Petris, Michael J. ;
Polishchuk, Roman ;
Ralle, Martina ;
Schilsky, Michael L. ;
Tonks, Nicholas K. ;
Vahdat, Linda T. ;
Van Aelst, Linda ;
Xi, Dan ;
Yuan, Peng ;
Brady, Donita C. ;
Chang, Christopher J. .
NATURE REVIEWS CANCER, 2022, 22 (02) :102-113
[8]   GSVA: gene set variation analysis for microarray and RNA-Seq data [J].
Haenzelmann, Sonja ;
Castelo, Robert ;
Guinney, Justin .
BMC BIOINFORMATICS, 2013, 14
[9]   TOX-expressing terminally exhausted tumor-infiltrating CD8+ T cells are reinvigorated by co-blockade of PD-1 and TIGIT in bladder cancer [J].
Han, Hye Sook ;
Jeong, Seongju ;
Kim, Hyunglae ;
Kim, Hyung-Don ;
Kim, A. Reum ;
Kwon, Minsuk ;
Park, Su-Hyung ;
Woo, Chang Gok ;
Kim, Hee Kyung ;
Lee, Ki Hyeong ;
Seo, Sung Pil ;
Kang, Ho Won ;
Kim, Won Tae ;
Kim, Wun-Jae ;
Yun, Seok Joong ;
Shin, Eui-Cheol .
CANCER LETTERS, 2021, 499 :137-147
[10]   Copper-induced tumor cell death mechanisms and antitumor theragnostic applications of copper complexes [J].
Jiang, Yicheng ;
Huo, Zhiyi ;
Qi, Xiaole ;
Zuo, Tongmei ;
Wu, Zhenghong .
NANOMEDICINE, 2022, 17 (05) :303-324