Characterization of long cDNA clones from human adult spleen

被引:9
作者
Hattori, A
Okumura, K
Nagase, T
Kikuno, R
Hirosawa, M
Ohara, O
机构
[1] Kazusa DNA Res Inst, Chiba 2920812, Japan
[2] Aisin Cosmos R&D Co Ltd, Chiba 2920812, Japan
关键词
long cDNA; single-pass sequence; cDNA sequencing; expression profile; alternative splicing; spleen;
D O I
10.1093/dnares/7.6.357
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
As an extension of our analysis of long cDNAs, we here report the characterization of cDNA clones from human adult spleen. From 2000 cDNA clones randomly sampled from a size-fractionated human spleen cDNA library (average size 4.5 kb), 97 clones were selected for sequencing according to their ability to code for protein at the 5'-end sequences and the novelty of their end sequences. The sequence data of these clones demonstrated that 87 out of 97 cDNA clones were derived from independent human genes. The average sizes of the inserts and corresponding open reading frames of these 87 cDNAs reached 4.5 kb and 1.4 kb (corresponding to 468 amino acid residues), respectively. In addition to these sequence analyses in silico, the expression profiles of the genes were also studied in ten human adult tissues by reverse transcription-coupled polymerase chain reaction, products of which were quantified by enzyme-linked immunosorbent assay. The results indicated that spleen could be used as an additional source of human long cDNAs to complement the list of human genes.
引用
收藏
页码:357 / 366
页数:10
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