Cascaded Multi-view Canonical Correlation (CaMCCo) for Early Diagnosis of Alzheimer's Disease via Fusion of Clinical, Imaging and Omic Features

被引:15
作者
Singanamalli, Asha [1 ]
Wang, Haibo [1 ]
Madabhushi, Anant [1 ]
机构
[1] Case Western Reserve Univ, Dept Biomed Engn, Cleveland, OH 44106 USA
基金
加拿大健康研究院; 美国国家卫生研究院;
关键词
MILD COGNITIVE IMPAIRMENT; NATIONAL INSTITUTE; CSF BIOMARKERS; CLASSIFICATION; FRAMEWORK; ASSOCIATION; PREDICTION; REPRESENTATION; INTEGRATION; DEMENTIA;
D O I
10.1038/s41598-017-03925-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The introduction of mild cognitive impairment (MCI) as a diagnostic category adds to the challenges of diagnosing Alzheimer's Disease (AD). No single marker has been proven to accurately categorize patients into their respective diagnostic groups. Thus, previous studies have attempted to develop fused predictors of AD and MCI. These studies have two main limitations. Most do not simultaneously consider all diagnostic categories and provide suboptimal fused representations using the same set of modalities for prediction of all classes. In this work, we present a combined framework, cascaded multiview canonical correlation (CaMCCo), for fusion and cascaded classification that incorporates all diagnostic categories and optimizes classification by selectively combining a subset of modalities at each level of the cascade. CaMCCo is evaluated on a data cohort comprising 149 patients for whom neurophysiological, neuroimaging, proteomic and genomic data were available. Results suggest that fusion of select modalities for each classification task outperforms (mean AUC = 0.92) fusion of all modalities (mean AUC = 0.54) and individual modalities (mean AUC = 0.90, 0.53, 0.71, 0.73, 0.62, 0.68). In addition, CaMCCo outperforms all other multi-class classification methods for MCI prediction (PPV: 0.80 vs. 0.67, 0.63).
引用
收藏
页数:14
相关论文
共 43 条
[31]   Vitamin E and donepezil for the treatment of mild cognitive impairment [J].
Petersen, RC ;
Thomas, RG ;
Grundman, M ;
Bennett, D ;
Doody, R ;
Ferris, S ;
Galasko, D ;
Jin, S ;
Kaye, J ;
Levey, A ;
Pfeiffer, E ;
Sano, M ;
van Dyck, CH ;
Thal, LJ .
NEW ENGLAND JOURNAL OF MEDICINE, 2005, 352 (23) :2379-2388
[32]   Classification and prediction of clinical Alzheimer's diagnosis based on plasma signaling proteins [J].
Ray, Sandip ;
Britschgi, Markus ;
Herbert, Charles ;
Takeda-Uchimura, Yoshiko ;
Boxer, Adam ;
Blennow, Kaj ;
Friedman, Leah F. ;
Galasko, Douglas R. ;
Jutel, Marek ;
Karydas, Anna ;
Kaye, Jeffrey A. ;
Leszek, Jerzy ;
Miller, Bruce L. ;
Minthon, Lennart ;
Quinn, Joseph F. ;
Rabinovici, Gil D. ;
Robinson, William H. ;
Sabbagh, Marwan N. ;
So, Yuen T. ;
Sparks, D. Larry ;
Tabaton, Massimo ;
Tinklenberg, Jared ;
Yesavage, Jerome A. ;
Tibshirani, Robert ;
Wyss-Coray, Tony .
NATURE MEDICINE, 2007, 13 (11) :1359-1362
[33]   MRI and cerebrospinal fluid biomarkers for predicting progression to Alzheimer's disease in patients with mild cognitive impairment: a diagnostic accuracy study [J].
Richard, Edo ;
Schmand, Ben A. ;
Eikelenboom, Piet ;
Van Gool, Willem A. .
BMJ OPEN, 2013, 3 (06)
[34]   Multi-classifier framework for atlas-based image segmentation [J].
Rohlfing, T ;
Maurer, CR .
PATTERN RECOGNITION LETTERS, 2005, 26 (13) :2070-2079
[35]   Specificity, sensitivity, and predictive value of apolipoprotein-E genotyping for sporadic Alzheimer's disease [J].
Saunders, AM ;
Hulette, C ;
WelshBohmer, KA ;
Schmechel, DE ;
Crain, B ;
Burke, JR ;
Alberts, MJ ;
Strittmatter, WJ ;
Breitner, JCS ;
Rosenberg, C ;
Scott, SV ;
Gaskell, PC ;
PericakVance, MA ;
Roses, AD .
LANCET, 1996, 348 (9020) :90-93
[36]  
Singanamalli A., 2014, SPIE MED IMAGING
[37]   Hierarchical feature representation and multimodal fusion with deep learning for AD/MCI diagnosis [J].
Suk, Heung-Il ;
Lee, Seong-Whan ;
Shen, Dinggang .
NEUROIMAGE, 2014, 101 :569-582
[38]   Class label versus sample label-based CCA [J].
Sun, Tingkai ;
Chen, Songcan .
APPLIED MATHEMATICS AND COMPUTATION, 2007, 185 (01) :272-283
[39]  
Tiwari P, 2011, I S BIOMED IMAGING, P165, DOI 10.1109/ISBI.2011.5872379
[40]  
Wallin A., 2005, DEMENTIA GERIATRIC C, V21, P131