Metabolomics Approach for Investigation of Effects of Dengue Virus Infection Using the EA hy926 Cell Line

被引:61
作者
Birungi, Grace [1 ]
Chen, Sheryl Meijie [1 ]
Loy, Boon Pheng [2 ]
Ng, Mah Lee [2 ]
Li, Sam Fong Yau [1 ]
机构
[1] Natl Univ Singapore, Dept Chem, Singapore 117543, Singapore
[2] Natl Univ Singapore, Natl Univ Hlth Syst, Yong Loo Lin Sch Med, Dept Microbiol, Singapore 117597, Singapore
基金
新加坡国家研究基金会;
关键词
Dengue; metabolomics; metabolic profiling; EA hy926; H-1; NMR; MS; HUMAN ENDOTHELIAL-CELLS; HUMAN GENES; IMMUNOPATHOGENESIS; SPECTROSCOPY; METABONOMICS; H-1-NMR; HMDB;
D O I
10.1021/pr100727m
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
This paper describes a multiplatform analytical approach combining proton nuclear magnetic resonance (H-1 NMR) Spectroscopy and mass spectrometry (MS) together with pattern recognition tools in a metabolomic study used to investigate the effects of dengue virus infection The four serotypes of dengue, DEN-1, DEN-2, DEN-3, and DEN-4, were inoculated into the EA hy926 cell line, which was then incubated for various time intervals Principal component analysis (PCA) of the H-1 NMR and MS data revealed metabolic profile patterns or fingerprint patterns that can be attributed to specific virus serotypes Distinct effects of infection by each serotype were demonstrated, and these differences were attributed to changes in levels of metabolites (including amino acids, dicarboxylic acids, fatty acids and organic acids related to the tricarboxylic acid (TCA) cycle) The study demonstrated application of metabolomics to improve understanding of the effect of dengue infection on endothelial cells' metabolome
引用
收藏
页码:6523 / 6534
页数:12
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