DETECTION AND ESTIMATION OF MEMBRANE DIFFUSION DURING EXOCYTOSIS IN TIRFM IMAGE SEQUENCES

被引:0
作者
Basset, A. [1 ]
Bouthemy, P. [1 ]
Boulanger, J. [2 ]
Waharte, F. [2 ]
Kervrann, C. [1 ]
Salamero, J. [2 ]
机构
[1] Ctr Rennes Bretagne Atlantique, Inria, Campus Univ Beaulieu, F-35042 Rennes, France
[2] Inst Curie, CNRS, UMR 144, F-75005 Paris, France
来源
2015 IEEE 12th International Symposium on Biomedical Imaging (ISBI) | 2015年
关键词
Event detection; diffusion estimation; exocytosis dynamics; lateral diffusion in membrane; TIRFM; FLUORESCENCE CORRELATION SPECTROSCOPY; LATERAL DIFFUSION; DYNAMICS; PROTEINS; MOBILITY; MOTION; CELLS;
D O I
暂无
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
Assessing the dynamics of plasma membrane diffusion processes in live cell fluorescence microscopy is of paramount interest to understand cell mechanisms. We propose a new method to detect vesicle fusion events, and estimate the associated diffusion coefficients in image sequences of total internal reflection fluorescence microscopy (TIRFM). In contrast to usual approaches, a diffusion coefficient is locally estimated for each detected fusing vesicle. We first detect the membrane fusion events and then select the diffusion configurations among them with a correlation test. To estimate the diffusion coefficient, a geometric model is fitted to the detected spot directly in the 2D+t subvolume. Quantitative results demonstrate the accuracy of the proposed method.
引用
收藏
页码:695 / 698
页数:4
相关论文
共 17 条
[1]  
Almeida P.F. F., 1995, STRUCTURE DYNAMICS M, V1, P305, DOI [10.1016/S1383-8121(06)80023-0, 10.1016/S1383-8121, DOI 10.1016/S1383-8121]
[2]   MOBILITY MEASUREMENT BY ANALYSIS OF FLUORESCENCE PHOTOBLEACHING RECOVERY KINETICS [J].
AXELROD, D ;
KOPPEL, DE ;
SCHLESSINGER, J ;
ELSON, E ;
WEBB, WW .
BIOPHYSICAL JOURNAL, 1976, 16 (09) :1055-1069
[3]  
Basset A., 2014, IEEE INT S BIOM IMAG
[4]   Methods to measure the lateral diffusion of membrane lipids and proteins [J].
Chen, Yun ;
Lagerholm, B. Christoffer ;
Yang, Bing ;
Jacobson, Ken .
METHODS, 2006, 39 (02) :147-153
[5]   Efficient annotation of vesicle dynamics in video microscopy [J].
Cortes, Leandro ;
Amit, Yali .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 2008, 30 (11) :1998-2010
[6]  
Crank J., 1979, MATH DIFFUSION, V2nd
[7]   Fast spatiotemporal correlation spectroscopy to determine protein lateral diffusion laws in live cell membranes [J].
Di Rienzo, Carmine ;
Gratton, Enrico ;
Beltram, Fabio ;
Cardarelli, Francesco .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2013, 110 (30) :12307-12312
[8]   Fluorescence correlation spectroscopy for the study of membrane dynamics and protein/lipid interactions [J].
Garcia-Saez, Ana J. ;
Schwille, Petra .
METHODS, 2008, 46 (02) :116-122
[9]   Molecular diffusion measurement in lipid Bilayers over wide concentration ranges: A comparative study [J].
Guo, Lin ;
Har, Jia Yi ;
Sankaran, Jagadish ;
Hong, Yimian ;
Kannan, Balakrishnan ;
Wohland, Thorsten .
CHEMPHYSCHEM, 2008, 9 (05) :721-728
[10]   Nonrigid Registration of 2-D and 3-D Dynamic Cell Nuclei Images for Improved Classification of Subcellular Particle Motion [J].
Kim, Il-Han ;
Chen, Yi-Chun M. ;
Spector, David L. ;
Eils, Roland ;
Rohr, Karl .
IEEE TRANSACTIONS ON IMAGE PROCESSING, 2011, 20 (04) :1011-1022