Poisson-Boltzmann modeling and molecular dynamics simulations of polyelectrolyte gel diodes in the static regime

被引:8
|
作者
Triandafilidi, Vasilii [1 ]
Hatzikiriakos, Savvas G. [1 ]
Rottler, Jorg [2 ,3 ]
机构
[1] Univ British Columbia, Dept Chem Engn, Vancouver, BC V6T 1Z4, Canada
[2] Univ British Columbia, Dept Phys & Astron, Vancouver, BC V6T 1Z1, Canada
[3] Univ British Columbia, Quantum Matter Inst, Vancouver, BC V6T 1Z1, Canada
关键词
D O I
10.1039/c9sm02232e
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We present molecular dynamics (MD) simulations of a model polyelectrolyte gel diode formed by a junction of two oppositely charged crosslinked polyelectrolyte networks, and compare the ion densities and electrostatic field to a corresponding continuum Poisson-Boltzmann (PB) model. At low electrostatic coupling strength (i.e. low Bjerrum lengths), the PB model reproduces the MD simulation results for density and electric field throughout the gel very well. At higher electrostatic coupling (i.e. large Bjerrum lengths) and higher degrees of ionization, the standard PB fails to predict the MD profiles at the diode interface due to counterion condensation, network collapse and field-induced gel deformation. In fact MD simulations predict that the rectifying behavior of diodes operating in such regimes will be much reduced. We develop a modified PB model that accounts for these effects, and show that it produces better agreement with the MD results. The updated PB model can be used for improved modeling of experimental results on PE gel diodes.
引用
收藏
页码:1091 / 1101
页数:11
相关论文
共 50 条
  • [1] Poisson-Boltzmann solvents in molecular dynamics Simulations
    Wang, Jun
    Tan, Chunhu
    Tan, Yu-Hong
    Lu, Qiang
    Luo, Ray
    COMMUNICATIONS IN COMPUTATIONAL PHYSICS, 2008, 3 (05) : 1010 - 1031
  • [2] POISSON-BOLTZMANN ELECTROSTATICS AND MOLECULAR MECHANICS SIMULATIONS
    GILSON, MK
    DAVIS, ME
    LUTY, BA
    MADURA, JD
    MCCAMMON, JA
    BIOPHYSICAL JOURNAL, 1993, 64 (02) : A354 - A354
  • [3] The Ionic Atmosphere around A-RNA: Poisson-Boltzmann and Molecular Dynamics Simulations
    Kirmizialtin, Serdal
    Silalahi, Alexander R. J.
    Elber, Ron
    Fenley, Marcia O.
    BIOPHYSICAL JOURNAL, 2012, 102 (04) : 829 - 838
  • [4] On achieving efficient molecular dynamics simulations with the finite difference Poisson-Boltzmann method.
    Luo, R
    Gilson, MK
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2000, 219 : U597 - U597
  • [5] Molecular dynamics simulation with Poisson-Boltzmann electrostatics.
    Madura, JD
    Gilson, M
    Wierzbicki, A
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1997, 214 : 192 - COMP
  • [6] Poisson-Boltzmann analytical gradients for molecular modeling calculations
    Friedrichs, M
    Zhou, RH
    Edinger, SR
    Friesner, RA
    JOURNAL OF PHYSICAL CHEMISTRY B, 1999, 103 (16): : 3057 - 3061
  • [7] Recent progress in adapting Poisson-Boltzmann methods to molecular simulations
    Xiao, Li
    Wang, Changhao
    Luo, Ray
    JOURNAL OF THEORETICAL & COMPUTATIONAL CHEMISTRY, 2014, 13 (03):
  • [8] Poisson-Boltzmann calculations versus molecular dynamics simulations for calculating the electrostatic potential of a solvated peptide
    Löffler, G
    THEORETICAL CHEMISTRY ACCOUNTS, 1999, 101 (1-3) : 163 - 169
  • [9] Poisson-Boltzmann calculations versus molecular dynamics simulations for calculating the electrostatic potential of a solvated peptide
    Gerald Löffler
    Theoretical Chemistry Accounts, 1999, 101 : 163 - 169
  • [10] Redox potentials in the decaheme cytochrome MtrF: Poisson-Boltzmann vs. molecular dynamics simulations
    Breuer, Marian
    Rosso, Kevin M.
    Blumberger, Jochen
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2017, 114 (47) : E10028 - E10028