Implementation of clinical tractography for pre-surgical planning of space occupying lesions: An investigation of common acquisition and post-processing methods compared to dissection studies
Background and purpose There is limited standardization of acquisition and processing methods in diffusion tractography for pre-surgical planning, leading to a range of approaches. In this study, a number of representative acquisition variants and post processing methods are considered, to assess their importance when implementing a clinical tractography program. Methods Diffusion MRI was undertaken in ten healthy volunteers, using protocols typical of clinical and research scanning: a 32-direction diffusion acquisition with and without peripheral gating, and a non-gated 64 diffusion direction acquisition. All datasets were post-processed using diffusion tensor reconstruction with streamline tractography, and with constrained spherical deconvolution (CSD) with both streamline and probabilistic tractography, to delineate the cortico-spinal tract (CST) and optic radiation (OR). The accuracy of tractography results was assessed against a histological atlas using a novel probabilistic Dice overlap technique, together with direct comparison to tract volumes and distance of Meyer's loop to temporal pole (ML-TP) from dissections studies. Three clinical case studies of patients with space occupying lesions were also investigated. Results Tracts produced by CSD with probabilistic tractography provided the greatest overlap with the histological atlas (overlap scores of 44% and 52% for the CST and OR, respectively) and best matched tract volume and ML-TP distance from dissection studies. The acquisition protocols investigated had limited impact on the accuracy of the tractography. In all patients, the CSD based probabilistic tractography created tracts with greatest anatomical plausibility, although in one case anatomically plausible pathways could not be reconstructed without reducing the probabilistic threshold, leading to an increase in false positive tracts. Conclusions Advanced post processing techniques such as CSD with probabilistic tractography are vital for pre-surgical planning. However, overall accuracy relative to dissection studies remains limited.
机构:
Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USA
Univ Calif Los Angeles, Semel Inst, Los Angeles, CA USAHarvard Univ, Sch Med, Boston, MA USA
Benjamin, Christopher F. A.
Singh, Jolene M.
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Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
Singh, Jolene M.
Prabhu, Sanjay P.
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机构:
Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
Prabhu, Sanjay P.
Warfield, Simon K.
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h-index: 0
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Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Bozzao, Alessandro
Romano, Andrea
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Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Romano, Andrea
Angelini, Albina
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Angelini, Albina
D'Andrea, Giancarlo
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Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
D'Andrea, Giancarlo
Calabria, Luigi Fausto
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Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Calabria, Luigi Fausto
Coppola, Valeria
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Coppola, Valeria
Mastronardi, Luciano
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Mastronardi, Luciano
Fantozzi, Luigi Maria
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h-index: 0
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Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Fantozzi, Luigi Maria
Ferrante, Luigi
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Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Bucci, Monica
Mandelli, Maria Luisa
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机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Mandelli, Maria Luisa
Berman, Jeffrey I.
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机构:
Univ Calif San Francisco, Dept Radiol & Biomed Imaging, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Berman, Jeffrey I.
Amirbekian, Bagrat
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h-index: 0
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Univ Calif San Francisco, Grad Grp Bioengn, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Amirbekian, Bagrat
Nguyen, Christopher
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机构:
Univ Calif San Francisco, Dept Radiol & Biomed Imaging, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Nguyen, Christopher
Berger, Mitchel S.
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机构:
Univ Calif San Francisco, Dept Neurol Surg, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Berger, Mitchel S.
Henry, Roland G.
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机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Univ Calif San Francisco, Grad Grp Bioengn, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Southern Med Univ, Jinling Hosp, Dept Neurosurg, Nanjing 210002, Jiangsu, Peoples R ChinaHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Chen, Zhenrui
Tie, Yanmei
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Tie, Yanmei
Olubiyi, Olutayo
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Olubiyi, Olutayo
Zhang, Fan
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Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Zhang, Fan
Mehrtash, Alireza
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Mehrtash, Alireza
Rigolo, Laura
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Rigolo, Laura
Kahali, Pegah
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机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Kahali, Pegah
Norton, Isaiah
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Norton, Isaiah
Pasternak, Ofer
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机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Psychiat, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Pasternak, Ofer
Rathi, Yogesh
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Harvard Med Sch, Brigham & Womens Hosp, Dept Psychiat, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Rathi, Yogesh
Golby, Alexandra J.
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Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Golby, Alexandra J.
O'Donnell, Lauren J.
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机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
机构:
Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USA
Univ Calif Los Angeles, Semel Inst, Los Angeles, CA USAHarvard Univ, Sch Med, Boston, MA USA
Benjamin, Christopher F. A.
Singh, Jolene M.
论文数: 0引用数: 0
h-index: 0
机构:
Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
Singh, Jolene M.
Prabhu, Sanjay P.
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h-index: 0
机构:
Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
Prabhu, Sanjay P.
Warfield, Simon K.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Boston, MA USA
Boston Childrens Hosp, Dept Radiol, Boston, MA USAHarvard Univ, Sch Med, Boston, MA USA
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Bozzao, Alessandro
Romano, Andrea
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Romano, Andrea
Angelini, Albina
论文数: 0引用数: 0
h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Angelini, Albina
D'Andrea, Giancarlo
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
D'Andrea, Giancarlo
Calabria, Luigi Fausto
论文数: 0引用数: 0
h-index: 0
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Calabria, Luigi Fausto
Coppola, Valeria
论文数: 0引用数: 0
h-index: 0
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Coppola, Valeria
Mastronardi, Luciano
论文数: 0引用数: 0
h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Mastronardi, Luciano
Fantozzi, Luigi Maria
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
Fantozzi, Luigi Maria
Ferrante, Luigi
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h-index: 0
机构:
Univ Roma La Sapienza, Dept Neurosurg, Osped St Andrea, I-00189 Rome, ItalyUniv Roma La Sapienza, Dept Neuroradiol, Osped St Andrea, I-00189 Rome, Italy
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Bucci, Monica
Mandelli, Maria Luisa
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Mandelli, Maria Luisa
Berman, Jeffrey I.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Radiol & Biomed Imaging, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Berman, Jeffrey I.
Amirbekian, Bagrat
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Univ Calif San Francisco, Grad Grp Bioengn, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Amirbekian, Bagrat
Nguyen, Christopher
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h-index: 0
机构:
Univ Calif San Francisco, Dept Radiol & Biomed Imaging, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Nguyen, Christopher
Berger, Mitchel S.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Neurol Surg, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Berger, Mitchel S.
Henry, Roland G.
论文数: 0引用数: 0
h-index: 0
机构:
Univ Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
Univ Calif San Francisco, Grad Grp Bioengn, San Francisco, CA 94158 USAUniv Calif San Francisco, Dept Neurol, San Francisco, CA 94158 USA
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Southern Med Univ, Jinling Hosp, Dept Neurosurg, Nanjing 210002, Jiangsu, Peoples R ChinaHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Chen, Zhenrui
Tie, Yanmei
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Tie, Yanmei
Olubiyi, Olutayo
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Olubiyi, Olutayo
Zhang, Fan
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Zhang, Fan
Mehrtash, Alireza
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Mehrtash, Alireza
Rigolo, Laura
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Rigolo, Laura
Kahali, Pegah
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Kahali, Pegah
Norton, Isaiah
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Norton, Isaiah
Pasternak, Ofer
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Psychiat, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Pasternak, Ofer
Rathi, Yogesh
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Psychiat, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Rathi, Yogesh
Golby, Alexandra J.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA
Golby, Alexandra J.
O'Donnell, Lauren J.
论文数: 0引用数: 0
h-index: 0
机构:
Harvard Med Sch, Brigham & Womens Hosp, Dept Radiol, Boston, MA 02115 USAHarvard Med Sch, Brigham & Womens Hosp, Dept Neurosurg, 75 Francis St, Boston, MA 02115 USA