Inference of the HIV-1 VRC01 Antibody Lineage Unmutated Common Ancestor Reveals Alternative Pathways to Overcome a Key Glycan Barrier

被引:51
作者
Bonsignori, Mattia [1 ,2 ]
Scott, Eric [1 ]
Wiehe, Kevin [1 ,2 ]
Easterhoff, David [1 ,2 ]
Alam, S. Munir [1 ,2 ]
Hwang, Kwan-Ki [1 ]
Cooper, Melissa [1 ]
Xia, Shi-Mao [1 ]
Zhang, Ruijun [1 ,13 ]
Montefiori, David C. [1 ,3 ]
Henderson, Rory [1 ]
Nie, Xiaoyan [4 ]
Kelsoe, Garnett [1 ]
Moody, M. Anthony [1 ,5 ]
Chen, Xuejun [6 ]
Joyce, M. Gordon [6 ,14 ,15 ]
Kwong, Peter D. [6 ]
Connors, Mark [7 ]
Mascola, John R. [6 ]
McGuire, Andrew T. [8 ,9 ]
Stamatatos, Leonidas [8 ,9 ]
Medina-Ramirez, Max [10 ]
Sanders, Rogier W. [10 ,11 ]
Saunders, Kevin O. [1 ,3 ]
Kepler, Thomas B. [12 ]
Haynes, Barton F. [1 ,2 ,4 ]
机构
[1] Duke Univ, Duke Human Vaccine Inst, Durham, NC 27708 USA
[2] Duke Univ, Dept Med, Durham, NC 27708 USA
[3] Duke Univ, Dept Surg, Durham, NC USA
[4] Duke Univ, Dept Immunol, Durham, NC 27708 USA
[5] Duke Univ, Dept Pediat, Durham, NC 27706 USA
[6] NIAID, Vaccine Res Ctr, NIH, 9000 Rockville Pike, Bethesda, MD 20892 USA
[7] NIAID, Immunoregulat Lab, NIH, Bldg 10, Bethesda, MD 20892 USA
[8] Fred Hutchinson Canc Res Ctr, Vaccine & Infect Dis Div, 1124 Columbia St, Seattle, WA 98104 USA
[9] Univ Washington, Dept Global Hlth, Seattle, WA 98195 USA
[10] Univ Amsterdam, Acad Med Ctr, Dept Med Microbiol, Amsterdam, Netherlands
[11] Cornell Univ, Weill Med Coll, Dept Microbiol & Immunol, New York, NY 10021 USA
[12] Boston Univ, Sch Med, Dept Microbiol, Boston, MA 02118 USA
[13] Sanofi, Framingham, MA USA
[14] Walter Reed Army Inst Res, US Mil HIV Res Program, Silver Spring, MD USA
[15] Henry M Jackson Fdn Adv Mil Med Inc, Bethesda, MD USA
基金
美国国家卫生研究院; 比尔及梅琳达.盖茨基金会;
关键词
BROADLY NEUTRALIZING ANTIBODIES; MONOCLONAL-ANTIBODIES; MOLECULAR-DYNAMICS; SOMATIC HYPERMUTATION; MATURATION PATHWAY; IMMUNOGEN DESIGN; STRUCTURAL BASIS; CELL-LINES; B-CELLS; GERMLINE;
D O I
10.1016/j.immuni.2018.10.015
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Elicitation of VRC01-class broadly neutralizing antibodies (bnAbs) is an appealing approach for a preventative HIV-1 vaccine. Despite extensive investigations, strategies to induce VRC01-class bnAbs and overcome the barrier posed by the envelope N276 glycan have not been successful. Here, we inferred a high-probability unmutated common ancestor (UCA) of the VRC01 lineage and reconstructed the stages of lineage maturation. Env immunogens designed on reverted VRC01-class bnAbs bound to VRC01 UCA with affinity sufficient to activate naive B cells. Early mutations defined maturation pathways toward limited or broad neutralization, suggesting that focusing the immune response is likely required to steer B cell maturation toward the development of neutralization breadth. Finally, VRC01 lineage bnAbs with long CDR H3s overcame the HIV-1 N276 glycan barrier without shortening their CDR L1, revealing a solution for broad neutralization in which the heavy chain, not CDR L1, is the determinant to accommodate the N276 glycan.
引用
收藏
页码:1162 / +
页数:21
相关论文
共 75 条
[1]   Vectored immunoprophylaxis protects humanized mice from mucosal HIV transmission [J].
Balazs, Alejandro B. ;
Ouyang, Yong ;
Hong, Christin M. ;
Chen, Joyce ;
Nguyen, Steven M. ;
Rao, Dinesh S. ;
An, Dong Sung ;
Baltimore, David .
NATURE MEDICINE, 2014, 20 (03) :296-300
[2]   Therapeutic efficacy of potent neutralizing HIV-1-specific monoclonal antibodies in SHIV-infected rhesus monkeys [J].
Barouch, Dan H. ;
Whitney, James B. ;
Moldt, Brian ;
Klein, Florian ;
Oliveira, Thiago Y. ;
Liu, Jinyan ;
Stephenson, Kathryn E. ;
Chang, Hui-Wen ;
Shekhar, Karthik ;
Gupta, Sanjana ;
Nkolola, Joseph P. ;
Seaman, Michael S. ;
Smith, Kaitlin M. ;
Borducchi, Erica N. ;
Cabral, Crystal ;
Smith, Jeffrey Y. ;
Blackmore, Stephen ;
Sanisetty, Srisowmya ;
Perry, James R. ;
Beck, Matthew ;
Lewis, Mark G. ;
Rinaldi, William ;
Chakraborty, Arup K. ;
Poignard, Pascal ;
Nussenzweig, Michel C. ;
Burton, Dennis R. .
NATURE, 2013, 503 (7475) :224-+
[3]   Composition and Antigenic Effects of Individual Glycan Sites of a Trimeric HIV-1 Envelope Glycoprotein [J].
Behrens, Anna-Janina ;
Vasiljevic, Snezana ;
Pritchard, Laura K. ;
Harvey, David J. ;
Andev, Rajinder S. ;
Krumm, Stefanie A. ;
Struwe, Weston B. ;
Cupo, Albert ;
Kumar, Abhinav ;
Zitzmann, Nicole ;
Seabright, Gemma E. ;
Kramer, Holger B. ;
Spencer, Daniel I. R. ;
Royle, Louise ;
Lee, Jeong Hyun ;
Klasse, Per J. ;
Burton, Dennis R. ;
Wilson, Ian A. ;
Ward, Andrew B. ;
Sanders, Rogier W. ;
Moore, John P. ;
Doores, Katie J. ;
Crispin, Max .
CELL REPORTS, 2016, 14 (11) :2695-2706
[4]  
BENJAMIN D, 1982, J IMMUNOL, V129, P1336
[5]   PASSENGER TRANSGENES REVEAL INTRINSIC SPECIFICITY OF THE ANTIBODY HYPERMUTATION MECHANISM - CLUSTERING, POLARITY, AND SPECIFIC HOT-SPOTS [J].
BETZ, AG ;
RADA, C ;
PANNELL, R ;
MILSTEIN, C ;
NEUBERGER, MS .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (06) :2385-2388
[6]   Staged induction of HIV-1 glycan-dependent broadly neutralizing antibodies [J].
Bonsignori, Mattia ;
Kreider, Edward F. ;
Fera, Daniela ;
Meyerhoff, R. Ryan ;
Bradley, Todd ;
Wiehe, Kevin ;
Alam, S. Munir ;
Aussedat, Baptiste ;
Walkowicz, William E. ;
Hwang, Kwan-Ki ;
Saunders, Kevin O. ;
Zhang, Ruijun ;
Gladden, Morgan A. ;
Monroe, Anthony ;
Kumar, Amit ;
Xia, Shi-Mao ;
Cooper, Melissa ;
Louder, Mark K. ;
McKee, Krisha ;
Bailer, Robert T. ;
Pier, Brendan W. ;
Jette, Claudia A. ;
Kelsoe, Garnett ;
Williams, Wilton B. ;
Morris, Lynn ;
Kappes, John ;
Wagh, Kshitij ;
Kamanga, Gift ;
Cohen, Myron S. ;
Hraber, Peter T. ;
Montefiori, David C. ;
Trama, Ashley ;
Liao, Hua-Xin ;
Kepler, Thomas B. ;
Moody, M. Anthony ;
Gao, Feng ;
Danishefsky, Samuel J. ;
Mascola, John R. ;
Shaw, George M. ;
Hahn, Beatrice H. ;
Harrison, Stephen C. ;
Korber, Bette T. ;
Haynes, Barton F. .
SCIENCE TRANSLATIONAL MEDICINE, 2017, 9 (381)
[7]   Maturation Pathway from Germline to Broad HIV-1 Neutralizer of a CD4-Mimic Antibody [J].
Bonsignori, Mattia ;
Zhou, Tongqing ;
Sheng, Zizhang ;
Chen, Lei ;
Gao, Feng ;
Joyce, M. Gordon ;
Ozorowski, Gabriel ;
Chuang, Gwo-Yu ;
Schramm, Chaim A. ;
Wiehe, Kevin ;
Alam, S. Munir ;
Bradley, Todd ;
Gladden, Morgan A. ;
Hwang, Kwan-Ki ;
Iyengar, Sheelah ;
Kumar, Amit ;
Lu, Xiaozhi ;
Luo, Kan ;
Mangiapani, Michael C. ;
Parks, Robert J. ;
Song, Hongshuo ;
Acharya, Priyamvada ;
Bailer, Robert T. ;
Cao, Allen ;
Druz, Aliaksandr ;
Georgiev, Ivelin S. ;
Kwon, Young D. ;
Louder, Mark K. ;
Zhang, Baoshan ;
Zheng, Anqi ;
Hill, Brenna J. ;
Kong, Rui ;
Soto, Cinque ;
Mullikin, James C. ;
Douek, Daniel C. ;
Montefiori, David C. ;
Moody, Michael A. ;
Shaw, George M. ;
Hahn, Beatrice H. ;
Kelsoe, Garnett ;
Hraber, Peter T. ;
Korber, Bette T. ;
Boyd, Scott D. ;
Fire, Andrew Z. ;
Kepler, Thomas B. ;
Shapiro, Lawrence ;
Ward, Andrew B. ;
Mascola, John R. ;
Liao, Hua-Xin ;
Kwong, Peter D. .
CELL, 2016, 165 (02) :449-463
[8]   An autoreactive antibody from an SLE/HIV-1 individual broadly neutralizes HIV-1 [J].
Bonsignori, Mattia ;
Wiehe, Kevin ;
Grimm, Sebastian K. ;
Lynch, Rebecca ;
Yang, Guang ;
Kozink, Daniel M. ;
Perrin, Florence ;
Cooper, Abby J. ;
Hwang, Kwan-Ki ;
Chen, Xi ;
Liu, Mengfei ;
McKee, Krisha ;
Parks, Robert J. ;
Eudailey, Joshua ;
Wang, Minyue ;
Clowse, Megan ;
Criscione-Schreiber, Lisa G. ;
Moody, M. Anthony ;
Ackerman, Margaret E. ;
Boyd, Scott D. ;
Gao, Feng ;
Kelsoe, Garnett ;
Verkoczy, Laurent ;
Tomaras, Georgia D. ;
Liao, Hua-Xin ;
Kepler, Thomas B. ;
Montefiori, David C. ;
Mascola, John R. ;
Haynes, Barton F. .
JOURNAL OF CLINICAL INVESTIGATION, 2014, 124 (04) :1835-1843
[9]   Analysis of a Clonal Lineage of HIV-1 Envelope V2/V3 Conformational Epitope-Specific Broadly Neutralizing Antibodies and Their Inferred Unmutated Common Ancestors [J].
Bonsignori, Mattia ;
Hwang, Kwan-Ki ;
Chen, Xi ;
Tsao, Chun-Yen ;
Morris, Lynn ;
Gray, Elin ;
Marshall, Dawn J. ;
Crump, John A. ;
Kapiga, Saidi H. ;
Sam, Noel E. ;
Sinangil, Faruk ;
Pancera, Marie ;
Yang Yongping ;
Zhang, Baoshan ;
Zhu, Jiang ;
Kwong, Peter D. ;
O'Dell, Sijy ;
Mascola, John R. ;
Wu, Lan ;
Nabel, Gary J. ;
Phogat, Sanjay ;
Seaman, Michael S. ;
Whitesides, John F. ;
Moody, M. Anthony ;
Kelsoe, Garnett ;
Yang, Xinzhen ;
Sodroski, Joseph ;
Shaw, George M. ;
Montefiori, David C. ;
Kepler, Thomas B. ;
Tomaras, Georgia D. ;
Alam, S. Munir ;
Liao, Hua-Xin ;
Haynes, Barton F. .
JOURNAL OF VIROLOGY, 2011, 85 (19) :9998-10009
[10]   Tailored Immunogens Direct Affinity Maturation toward HIV Neutralizing Antibodies [J].
Briney, Bryan ;
Sok, Devin ;
Jardine, Joseph G. ;
Kulp, Daniel W. ;
Skog, Patrick ;
Menis, Sergey ;
Jacak, Ronald ;
Kalyuzhniy, Oleksandr ;
de Val, Natalia ;
Sesterhenn, Fabian ;
Le, Khoa M. ;
Ramos, Alejandra ;
Jones, Meaghan ;
Saye-Francisco, Karen L. ;
Blane, Tanya R. ;
Spencer, Skye ;
Georgeson, Erik ;
Hu, Xiaozhen ;
Ozorowski, Gabriel ;
Adachi, Yumiko ;
Kubitz, Michael ;
Sarkar, Anita ;
Wilson, Ian A. ;
Ward, Andrew B. ;
Nemazee, David ;
Burton, Dennis R. ;
Schief, William R. .
CELL, 2016, 166 (06) :1459-+