Update of the UMD-FBN1 mutation database and creation of an FBN1 polymorphlism database

被引:260
作者
Collod-Béroud, G
Le Bourdelles, S
Ades, L
Ala-Kokko, L
Booms, P
Boxer, M
Child, A
Comeglio, P
De Paepe, A
Hyland, JC
Holman, K
Kaitila, I
Loeys, B
Matyas, G
Nuytinck, L
Peltonen, L
Rantamaki, T
Robinson, P
Steinmann, B
Junien, C
Béroud, C
Boileau, C
机构
[1] IURC, Genet Mol Lab, F-34093 Montpellier 5, France
[2] Univ Paris 05, Hop Necker Enfants Malad, INSERM U383, Paris, France
[3] Hop Ambroise Pare, Lab Cent Biochim Hormonol & Genet Mol, Boulogne, France
[4] Childrens Hosp, Marfan Res Grp, Westmoreland, Australia
[5] Childrens Hosp, Dept Mol Genet, Westmoreland, Australia
[6] Royal Alexandra Hosp Children, Dept Paediat & Child Hlth, Sydney, NSW, Australia
[7] Univ Oulu, Bioctr, Collagen Res Unit, Oulu, Finland
[8] Univ Oulu, Dept Med Biochem & Mol Biol, Oulu, Finland
[9] Tulane Univ, Hlth Sci Ctr, Ctr Gene Therapy, New Orleans, LA 70118 USA
[10] Tulane Univ, Hlth Sci Ctr, Dept Med, New Orleans, LA 70118 USA
[11] Univ Klinikum Berlin, Charite, Inst Med Genet, Berlin, Germany
[12] Inst Child Hlth, N Thames E Clin Mol Genet Lab, Unit Clin Genet & Fetal Med, London, England
[13] Univ London St Georges Hosp, Sch Med, Dept Cardiol Sci, Sonalee Lab Marfan Syndrome & Related Disorders, London SW17 0RE, England
[14] Ghent Univ Hosp, Ctr Med Genet, B-9000 Ghent, Belgium
[15] Tulane Univ, Hlth Sci Ctr, Dept Pathol & Lab Med, New Orleans, LA 70118 USA
[16] Tulane Univ, Hlth Sci Ctr, Ctr Gene Therapy, New Orleans, LA 70118 USA
[17] Univ Helsinki, Cent Hosp, Clin Genet Unit, Helsinki, Finland
[18] Univ Zurich, Childrens Hosp, Div Metab & Mol Pediat, Zurich, Switzerland
[19] Univ Calif Los Angeles, Sch Med, Dept Human Genet, Los Angeles, CA USA
[20] Natl Publ Hlth Inst, Dept Human Mol Genet, Helsinki, Finland
关键词
fibrillin-1; FBN; 1; fibrillinopathies; Marfan syndrome; MFS; database;
D O I
10.1002/humu.10249
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Fibrillin is the major component of extracellular microfibrils. Mutations in the fibrillin gene on chromosome 15 (FBN1) were first described in the heritable connective disorder, Marfan syndrome (MFS). FBN1 has also been shown to harbor mutations related to a spectrum of conditions phenotypically related to MFS, called "type-1 fibrillinopathies." In 1995, in an effort to standardize the information regarding these mutations and to facilitate their mutational analysis and identification of structure/function and phenotype/genotype relationships, we created a human FBN1 mutation database, UMD-FBN1. This database gives access to a software package that provides specific routines and optimized multicriteria research and sorting tools. For each mutation, information is provided at the gene, protein, and clinical levels. This toot is now a worldwide reference and is frequently used by teams working in the field; more than 220,000 interrogations have been made to it since January 1998. The database has recently been modified to follow the guidelines on mutation databases of the HUGO Mutation Database Initiative (MDI) and the Human Genome Variation Society (HGVS), including their approved mutation nomenclature. The current update shows 559 entries, of which 421 are novel. UMD-FBN1 is accessible at www.umd.be/. We have also recently developed a FBN1 polymorphism database in order to facilitate diagnostics. (C) 2003 Wiley-Liss, Inc.
引用
收藏
页码:199 / 208
页数:10
相关论文
共 104 条
  • [71] PARTIAL SEQUENCE OF A CANDIDATE GENE FOR THE MARFAN-SYNDROME
    MASLEN, CL
    CORSON, GM
    MADDOX, BK
    GLANVILLE, RW
    SAKAI, LY
    [J]. NATURE, 1991, 352 (6333) : 334 - 337
  • [72] Matsukawa R, 2001, HUM MUTAT, V17, DOI 10.1002/1098-1004(2001)17:1<71::AID-HUMU9>3.0.CO
  • [73] 2-0
  • [74] A MUTATION IN FBN1 DISRUPTS PROFIBRILLIN PROCESSING AND RESULTS IN ISOLATED SKELETAL FEATURES OF THE MARFAN-SYNDROME
    MILEWICZ, DM
    GROSSFIELD, J
    CAO, SN
    KIELTY, C
    COVITZ, W
    JEWETT, T
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 1995, 95 (05) : 2373 - 2378
  • [75] Multiple molecular mechanisms underlying subdiagnostic variants of Marfan syndrome
    Montgomery, RA
    Geraghty, MT
    Bull, E
    Gelb, BD
    Johnson, M
    McIntosh, I
    Francomano, CA
    Dietz, HC
    [J]. AMERICAN JOURNAL OF HUMAN GENETICS, 1998, 63 (06) : 1703 - 1711
  • [76] NIJBROEK G, 1995, AM J HUM GENET, V57, P8
  • [77] Palz M, 2000, AM J MED GENET, V91, P212, DOI 10.1002/(SICI)1096-8628(20000320)91:3<212::AID-AJMG12>3.0.CO
  • [78] 2-3
  • [79] Fibrillin-1 (FBN1) gene frameshift mutations in Marfan patients:: genotype-phenotype correlation
    Pepe, G
    Giusti, B
    Evangelisti, L
    Porciani, MC
    Brunelli, T
    Giurlani, L
    Attanasio, M
    Fattori, R
    Bagni, C
    Comeglio, P
    Abbate, R
    Gensini, GF
    [J]. CLINICAL GENETICS, 2001, 59 (06) : 444 - 450
  • [80] GENOMIC ORGANIZATION OF THE SEQUENCE CODING FOR FIBRILLIN, THE DEFECTIVE GENE-PRODUCT IN MARFAN-SYNDROME
    PEREIRA, L
    DALESSIO, M
    RAMIREZ, F
    LYNCH, JR
    SYKES, B
    PANGILINAN, T
    BONADIO, J
    [J]. HUMAN MOLECULAR GENETICS, 1993, 2 (07) : 961 - 968