The complete chloroplast genome of Cirsium shansiense and its phylogenetic analysis

被引：2

作者：

Xu, Jinshi ^{[1
,2
]}

Dang, Han ^{[3
]}

Li, Huaizhu ^{[1
]}

机构：

[1] Xianyang Normal Univ, Sch Chem & Chem Engn, Xianyang 712000, Shaanxi, Peoples R China

[2] Northwest Univ, Sch Life Sci, Xian, Shaanxi, Peoples R China

[3] Chinese Acad Sci, Inst Earth Environm, Xian, Shaanxi, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期

基金：

中国博士后科学基金;

关键词：

Cirsium shansiense; chloroplast genome; phylogenetic analysis;

D O I：

10.1080/23802359.2020.1721032

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Cirsium shansiense is a common species in China, which can be used for traditional Chinese medicine. The chloroplast (cp) genome of C. shansiense exhibited a typical quadripartite cycle with 152,396 bp, including a pair of inverted repeat regions (IRa and IRb, 25,072 bp each), a large single-copy region (LSC, 83,517 bp), and a small single-copy region (SSC, 18,735 bp). One-hundred-thirty-three unique genes were assembled in the cp genome, including 88 protein genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis based on 17 cp genomes of related species of Asteraceae showed that C. shansiense was closely related to Cirsium vulgare. This study provides important information for identification and conservation of species of Cirsium spp.

引用

页码：1134 / 1135

页数：2

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