Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP

被引:57
作者
Carbone, Christine E. [1 ]
Loveland, Anna B. [1 ]
Gamper, Howard B., Jr. [2 ]
Hou, Ya-Ming [2 ]
Demo, Gabriel [1 ,3 ]
Korostelev, Andrei A. [1 ]
机构
[1] UMass Chan Med Sch, RNA Therapeut Inst, Worcester, MA 01655 USA
[2] Thomas Jefferson Univ, Dept Biochem & Mol Biol, Philadelphia, PA 19107 USA
[3] Masaryk Univ, Cent European Inst Technol, Kamenice 5, Brno 62500, Czech Republic
关键词
ELONGATION-FACTOR-G; TRANSFER-RNA TRANSLOCATION; CONFORMATIONAL-CHANGES; INTERSUBUNIT MOVEMENT; INTERMEDIATE STATES; CRYSTAL-STRUCTURE; STRUCTURAL BASIS; HYBRID STATE; 80S RIBOSOME; HYDROLYSIS;
D O I
10.1038/s41467-021-27415-0
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
During translation, a conserved GTPase elongation factor-EF-G in bacteria or eEF2 in eukaryotes-translocates tRNA and mRNA through the ribosome. EF-G has been proposed to act as a flexible motor that propels tRNA and mRNA movement, as a rigid pawl that biases unidirectional translocation resulting from ribosome rearrangements, or by various combinations of motor- and pawl-like mechanisms. Using time-resolved cryo-EM, we visualized GTP-catalyzed translocation without inhibitors, capturing elusive structures of ribosome.EF-G intermediates at near-atomic resolution. Prior to translocation, EF-G binds near peptidyl-tRNA, while the rotated 30S subunit stabilizes the EF-G GTPase center. Reverse 30S rotation releases Pi and translocates peptidyl-tRNA and EF-G by similar to 20 angstrom. An additional 4-angstrom translocation initiates EF-G dissociation from a transient ribosome state with highly swiveled 30S head. The structures visualize how nearly rigid EF-G rectifies inherent and spontaneous ribosomal dynamics into tRNA-mRNA translocation, whereas GTP hydrolysis and Pi release drive EF-G dissociation.
引用
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页数:13
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