Machine Learning in Analysing Invasively Recorded Neuronal Signals: Available Open Access Data Sources

被引:22
作者
Fabietti, Marcos [1 ]
Mahmud, Mufti [1 ]
Lotfi, Ahmad [1 ]
机构
[1] Nottingham Trent Univ, Dept Comp & Technol, Clifton Lane, Nottingham NG11 8NS, England
来源
BRAIN INFORMATICS, BI 2020 | 2020年 / 12241卷
关键词
Computational neuroscience; Neuroinformatics; Neuronal spikes; Neurophysiological signals; PERFORMANCE; EPILEPSY;
D O I
10.1007/978-3-030-59277-6_14
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Neuronal signals allow us to understand how the brain operates and this process requires sophisticated processing of the acquired signals, which is facilitated by machine learning-based methods. However, these methods require large amount of data to first train them on the patterns present in the signals and then employ them to identify patterns from unknown signals. This data acquisition process involves expensive and complex experimental setups which are often not available to all - especially to the computational researchers who mainly deal with the development of the methods. Therefore, there is a basic need for the availability of open access datasets which can be used as benchmark towards novel methodological development and performance comparison across different methods. This would facilitate newcomers in the field to experiment and develop novel methods and achieve more robust results through data aggregation. In this scenario, this paper presents a curated list of available open access datasets of invasive neuronal signals containing a total of more than 25 datasets.
引用
收藏
页码:151 / 162
页数:12
相关论文
共 56 条
[11]   Big data from small data: data-sharing in the 'long tail' of neuroscience [J].
Ferguson, Adam R. ;
Nielson, Jessica L. ;
Cragin, Melissa H. ;
Bandrowski, Anita E. ;
Martone, Maryann E. .
NATURE NEUROSCIENCE, 2014, 17 (11) :1442-1447
[12]  
Furth K, 2017, REPLICATION DATA NEU, DOI [10.7910/DVN/MIBZLZ, DOI 10.7910/DVN/MIBZLZ]
[13]   Data availability, reusability, and analytic reproducibility: evaluating the impact of a mandatory open data policy at the journal Cognition [J].
Hardwicke, Tom E. ;
Mathur, Maya B. ;
MacDonald, Kyle ;
Nilsonne, Gustav ;
Banks, George C. ;
Kidwell, Mallory C. ;
Mohr, Alicia Hofelich ;
Clayton, Elizabeth ;
Yoon, Erica J. ;
Tessler, Michael Henry ;
Lenne, Richie L. ;
Altman, Sara ;
Long, Bria ;
Frank, Michael C. .
ROYAL SOCIETY OPEN SCIENCE, 2018, 5 (08)
[14]  
Henin S., 2019, SCI REP-UK, V9, P1
[15]  
Mahmud Mufti, 2009, 11th International Congress of the IUPESM. World Congress on Medical Physics and Biomedical Engineering. Image Processing, Biosignal Processing, Modelling and Simulation, Biomechanics, P2062, DOI 10.1007/978-3-642-03882-2_547
[16]  
Mahmud M. S., 2012, Proceedings of the 2012 6th European Conference on Antennas and Propagation (EuCAP), P1, DOI 10.1109/EuCAP.2012.6206709
[17]   Deep Learning in Mining Biological Data [J].
Mahmud, Mufti ;
Kaiser, M. Shamim ;
McGinnity, T. Martin ;
Hussain, Amir .
COGNITIVE COMPUTATION, 2021, 13 (01) :1-33
[18]  
Mahmud M, 2019, ADV NEUROBIOL, V22, P233, DOI 10.1007/978-3-030-11135-9_10
[19]   Applications of Deep Learning and Reinforcement Learning to Biological Data [J].
Mahmud, Mufti ;
Kaiser, Mohammed Shamim ;
Hussain, Amir ;
Vassanelli, Stefano .
IEEE TRANSACTIONS ON NEURAL NETWORKS AND LEARNING SYSTEMS, 2018, 29 (06) :2063-2079
[20]   An Automated Method for Characterization of Evoked Single-Trial Local Field Potentials Recorded from Rat Barrel Cortex Under Mechanical Whisker Stimulation [J].
Mahmud, Mufti ;
Cecchetto, Claudia ;
Vassanelli, Stefano .
COGNITIVE COMPUTATION, 2016, 8 (05) :935-945