Machine Learning in Analysing Invasively Recorded Neuronal Signals: Available Open Access Data Sources

被引:22
作者
Fabietti, Marcos [1 ]
Mahmud, Mufti [1 ]
Lotfi, Ahmad [1 ]
机构
[1] Nottingham Trent Univ, Dept Comp & Technol, Clifton Lane, Nottingham NG11 8NS, England
来源
BRAIN INFORMATICS, BI 2020 | 2020年 / 12241卷
关键词
Computational neuroscience; Neuroinformatics; Neuronal spikes; Neurophysiological signals; PERFORMANCE; EPILEPSY;
D O I
10.1007/978-3-030-59277-6_14
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Neuronal signals allow us to understand how the brain operates and this process requires sophisticated processing of the acquired signals, which is facilitated by machine learning-based methods. However, these methods require large amount of data to first train them on the patterns present in the signals and then employ them to identify patterns from unknown signals. This data acquisition process involves expensive and complex experimental setups which are often not available to all - especially to the computational researchers who mainly deal with the development of the methods. Therefore, there is a basic need for the availability of open access datasets which can be used as benchmark towards novel methodological development and performance comparison across different methods. This would facilitate newcomers in the field to experiment and develop novel methods and achieve more robust results through data aggregation. In this scenario, this paper presents a curated list of available open access datasets of invasive neuronal signals containing a total of more than 25 datasets.
引用
收藏
页码:151 / 162
页数:12
相关论文
共 56 条
[1]   Automated EEG analysis of epilepsy: A review [J].
Acharya, U. Rajendra ;
Sree, S. Vinitha ;
Swapna, G. ;
Martis, Roshan Joy ;
Suri, Jasjit S. .
KNOWLEDGE-BASED SYSTEMS, 2013, 45 :147-165
[2]   Application of Convolutional Neural Network in Segmenting Brain Regions from MRI Data [J].
Ali, Hafsa Moontari ;
Kaiser, M. Shamim ;
Mahmud, Mufti .
BRAIN INFORMATICS, 2019, 11976 :136-146
[3]  
Amari Shun-Ichi, 2002, J Integr Neurosci, V1, P117, DOI 10.1142/S0219635202000128
[4]  
[Anonymous], 2016, NEUROTYCHO NEUROTYCH
[5]   An Attention-Based Spiking Neural Network for Unsupervised Spike-Sorting [J].
Bernert, Marie ;
Yvert, Blaise .
INTERNATIONAL JOURNAL OF NEURAL SYSTEMS, 2019, 29 (08)
[6]   A NWB-based dataset and processing pipeline of human single-neuron activity during a declarative memory task [J].
Chandravadia, N. ;
Liang, D. ;
Schjetnan, A. G. P. ;
Carlson, A. ;
Faraut, M. ;
Chung, J. M. ;
Reed, C. M. ;
Dichter, B. ;
Maoz, U. ;
Kalia, S. K. ;
Valiante, T. A. ;
Mamelak, A. N. ;
Rutishauser, U. .
SCIENTIFIC DATA, 2020, 7 (01)
[7]  
Chao Zenas C, 2010, Front Neuroeng, V3, P3, DOI 10.3389/fneng.2010.00003
[8]   Physiological and pathological high frequency oscillations in focal epilepsy [J].
Cimbalnik, Jan ;
Brinkmann, Benjamin ;
Kremen, Vaclav ;
Jurak, Pavel ;
Berry, Brent ;
Van Gompel, Jamie ;
Stead, Matt ;
Worrell, Greg .
ANNALS OF CLINICAL AND TRANSLATIONAL NEUROLOGY, 2018, 5 (09) :1062-1076
[9]  
Deweese M.R., 2011, **DATA OBJECT**, DOI 10.6080/K0G44N6R
[10]   Neural Network-based Artifact Detection in Local Field Potentials Recorded from Chronically Implanted Neural Probes [J].
Fabietti, Marcos ;
Mahmud, Mufti ;
Lotfi, Ahmad ;
Averna, Alberto ;
Guggenmos, David ;
Nudo, Randolph ;
Chiappalone, Michela .
2020 INTERNATIONAL JOINT CONFERENCE ON NEURAL NETWORKS (IJCNN), 2020,