Validation of a Real-Time RT-PCR Method to Quantify Newcastle Disease Virus (NDV) Titer and Comparison with Other Quantifiable Methods

被引:21
作者
Jang, Juno [1 ]
Hong, Sung-Hwan [2 ]
Kim, Ik-Hwan [1 ]
机构
[1] Korea Univ, Dept Biotechnol, Sch Life Sci & Biotechnol, Seoul 136701, South Korea
[2] Hanmi Res Ctr, Bio Team 2, Hwaseong Si 445813, South Korea
基金
新加坡国家研究基金会;
关键词
Method comparison; method validation; Newcastle disease virus (NDV); real-time RT-PCR (RRT-PCR); virus quantification; REVERSE-TRANSCRIPTION PCR; AVIAN INFLUENZA; FUSION PROTEIN; CLEAVAGE SITE; VACCINE; ASSAY; PATHOGENESIS; VIRULENCE; RNA;
D O I
10.4014/jmb.1006.06006
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A method for the rapid detection and quantification of Newcastle disease virus (NDV) produced in an animal cell culture-based production system was developed to enhance the speed of the NDV vaccine manufacturing process. A SYBR Green I-based real-time RT-PCR was designed with a conventional, inexpensive RT-PCR kit targeting the F gene of the NDV LaSota strain. The method developed in this study was validated for specificity, accuracy, precision, linearity, limit of detection (LOD), limit of quantification (LOQ), and robustness. The validation results satisfied the predetermined acceptance criteria. The validated method was used to quantify virus samples produced in an animal cell culture-based production system. The method was able to quantify the NDV samples from mid- or late-production phases, but not effective on samples from the early-production phase. For comparison with other quantifiable methods, immunoblotting, plaque assay, and tissue culture infectious dose 50 (TCID50) assay were also performed with the NDV samples. The results demonstrated that the real-time RT-PCR method is suitable for the rapid quantification of virus particles produced in an animal cell-culture-based production system irrespective of viral infectivity.
引用
收藏
页码:100 / 108
页数:9
相关论文
共 31 条
[1]   Newcastle disease and other avian paramyxoviruses [J].
Alexander, DJ .
REVUE SCIENTIFIQUE ET TECHNIQUE-OFFICE INTERNATIONAL DES EPIZOOTIES, 2000, 19 (02) :443-462
[2]  
ALEXANDER DJ, 2008, MANUAL DIAGNOSTIC TE, P576
[3]   COMPARISON OF TRYPAN BLUE-DYE EXCLUSION AND FLUOROMETRIC ASSAYS FOR MAMMALIAN-CELL VIABILITY DETERMINATIONS [J].
ALTMAN, SA ;
RANDERS, L ;
RAO, G .
BIOTECHNOLOGY PROGRESS, 1993, 9 (06) :671-674
[4]  
Beard C. W., 1984, Diseases of poultry, P452
[5]  
Burleson F.G., 1992, Virology: A Laboratory Manual, P53
[6]   Virulence of Newcastle diseasevirus is determined by the cleavage site of the fusion protein and by both the stem region and globular head of the haemagglutinin-neuraminidase protein [J].
de Leeuw, OS ;
Koch, G ;
Hartog, L ;
Ravenshorst, N ;
Peeters, BPH .
JOURNAL OF GENERAL VIROLOGY, 2005, 86 :1759-1769
[7]   Newcastle disease virus, a host range-restricted virus, as a vaccine vector for intranasal immunization against emerging pathogens [J].
DiNapoli, Joshua M. ;
Kotelkin, Alexander ;
Yang, Lijuan ;
Elankumaran, Subbiah ;
Murphy, Brian R. ;
Samal, Siba K. ;
Collins, Peter L. ;
Bukreyev, Alexander .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (23) :9788-9793
[8]   Optimization and validation of an alternative method to evaluate total reactive antioxidant potential [J].
Dresch, Maria T. K. ;
Rossato, Simone B. ;
Kappel, Virginia D. ;
Biegelmeyer, Renata ;
Hoff, Mariana L. M. ;
Mayorga, Paulo ;
Zuanazzi, Jose A. S. ;
Henriques, Amelia T. ;
Moreira, Jose C. F. .
ANALYTICAL BIOCHEMISTRY, 2009, 385 (01) :107-114
[9]   Hendra and Nipah viruses: different and dangerous [J].
Eaton, BT ;
Broder, CC ;
Middleton, D ;
Wang, LF .
NATURE REVIEWS MICROBIOLOGY, 2006, 4 (01) :23-35
[10]   Development of a real-time reverse-transcription PCR for the detection and simultaneous pathotyping of Newcastle disease virus isolates using a novel probe [J].
Fuller, Chad Marshal ;
Collins, M. S. ;
Alexander, D. J. .
ARCHIVES OF VIROLOGY, 2009, 154 (06) :929-937