Complete mitochondrial DNA genome of grey pomfret Pampus cinereus (Bloch, 1795) (Perciformes: Stromateidae)

被引：5

作者：

Wang, Shouqiang ^{[1
,2
]}

Zhao, Linlin ^{[2
]}

Li, Yuan ^{[3
]}

Zhang, Zhaohui ^{[2
]}

Wang, Zongling ^{[2
]}

Gao, Tianxiang ^{[4
]}

机构：

[1] Ocean Univ China, Coll Environm Scinence & Engn, Qingdao, Peoples R China

[2] SOA, Inst Oceanog 1, Qingdao, Peoples R China

[3] SOA, Inst Oceanog 3, Xiamen, Peoples R China

[4] Zhejiang Ocean Univ, Fishery Coll, Zhoushan 316000, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

基金：

中国国家自然科学基金;

关键词：

Stromateidae; mitochondrial genome; Pampus cinereus; ORGANIZATION; TELEOSTEI; SEQUENCE;

D O I：

10.1080/23802359.2018.1481788

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

In this study, we sequenced the complete mitochondrial genome of Pampus cinereus (Bloch, 1795). This mitochondrial genome, consisting of 16,540 base pairs (bp), contains 13 protein-coding genes, two ribosomal RNAs, 22 transfer RNAs, and two mainly noncoding regions (control region and origin of light-strand replication) as those found in other vertebrates. Control region with 846 bp in length, is located between tRNA(Pro) and tRNA(Phe). The overall base composition of the heavy strand shows 27.4% of T, 27.5% of C, 30.0% of A, and 15.2% of G, with a slight A+T rich bias (57.4%). The complete mitochondrial genome data will provide useful genetic markers for the studies on the molecular identification, population genetics, phylogenetic analysis and conservation genetics.

引用

页码：683 / 684

页数：2

共 11 条

[1] SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME [J].

ANDERSON, S ;

BANKIER, AT ;

BARRELL, BG ;

DEBRUIJN, MHL ;

COULSON, AR ;

DROUIN, J ;

EPERON, IC ;

NIERLICH, DP ;

ROE, BA ;

SANGER, F ;

SCHREIER, PH ;

SMITH, AJH ;

STADEN, R ;

YOUNG, IG .

NATURE, 1981, 290 (5806) :457-465

[2] The complete mitochondrial genome of Chinese sucker Myxocyprinus asiaticus (Cypriniformes, Catostomidae) [J].

Chen, I-Shiung .

MITOCHONDRIAL DNA, 2013, 24 (06) :680-682

[3] Complete mitochondrial genome sequence of bighead croaker Collichthys niveatus (Perciformes, Sciaenidae): A mitogenomic perspective on the phylogenetic relationships of Pseudosciaeniae [J].

Cheng, Jiao ;

Ma, Guo-qiang ;

Song, Na ;

Gao, Tian-xiang .

GENE, 2012, 491 (02) :210-223

[4] Complete mitochondrial genome of Sicyopterus japonicus (Perciformes, Gobiidae) [J].

Chiang, Tzen-Yuh ;

Chen, I-Shiung ;

Lin, Hung-Du ;

Chang, Wen-Been ;

Ju, Yu-Min .

MITOCHONDRIAL DNA, 2013, 24 (03) :191-193

[5] Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics [J].

Cui, Zhaoxia ;

Liu, Yuan ;

Li, Chi Pang ;

Chu, Ka Hou .

MOLECULAR BIOLOGY REPORTS, 2011, 38 (02) :1103-1114

[6] The complete mitochondrial genome of the large yellow croaker, Larimichthys crocea (Perciformes, Sciaenidae): Unusual features of its control region and the phylogenetic position of the Sciaenidae [J].

Cui, Zhaoxia ;

Liu, Yuan ;

Li, Chi Pang ;

You, Feng ;

Chu, Ka Hou .

GENE, 2009, 432 (1-2) :33-43

[7]

HAEDRICH RICHARD L., 1967, BULL MUS COMP ZOOL HARVARD UNIV, V135, P31

[8] Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes):: First example of transfer RNA gene rearrangements in bony fishes [J].

Miya, M ;

Nishida, M .

MARINE BIOTECHNOLOGY, 1999, 1 (05) :416-426

[9]

Parin N.V., 2004, J. Ichthyol., V44, P33

[10] MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods [J].

Tamura, Koichiro ;

Peterson, Daniel ;

Peterson, Nicholas ;

Stecher, Glen ;

Nei, Masatoshi ;

Kumar, Sudhir .

MOLECULAR BIOLOGY AND EVOLUTION, 2011, 28 (10) :2731-2739

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