The current issues and future perspective of artificial intelligence for developing new treatment strategy in non-small cell lung cancer: harmonization of molecular cancer biology and artificial intelligence

被引:26
作者
Tanaka, Ichidai [1 ]
Furukawa, Taiki [2 ]
Morise, Masahiro [1 ]
机构
[1] Nagoya Univ, Grad Sch Med, Dept Resp Med, Showa Ku, 65 Tsuruma Cho, Nagoya, Aichi 4668550, Japan
[2] Nagoya Univ, Ctr Healthcare Informat Technol C HiT, Nagoya, Aichi, Japan
基金
日本学术振兴会;
关键词
Artificial intelligence; NSCLC; SURFACTANT PROTEIN-B; CHECKPOINT BLOCKADE; KINASE INHIBITOR; OPEN-LABEL; TUMOR; ALK; CHEMOTHERAPY; CRIZOTINIB; GENE; CLASSIFICATION;
D O I
10.1186/s12935-021-02165-7
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Comprehensive analysis of omics data, such as genome, transcriptome, proteome, metabolome, and interactome, is a crucial technique for elucidating the complex mechanism of cancer onset and progression. Recently, a variety of new findings have been reported based on multi-omics analysis in combination with various clinical information. However, integrated analysis of multi-omics data is extremely labor intensive, making the development of new analysis technology indispensable. Artificial intelligence (AI), which has been under development in recent years, is quickly becoming an effective approach to reduce the labor involved in analyzing large amounts of complex data and to obtain valuable information that is often overlooked in manual analysis and experiments. The use of AI, such as machine learning approaches and deep learning systems, allows for the efficient analysis of massive omics data combined with accurate clinical information and can lead to comprehensive predictive models that will be desirable for further developing individual treatment strategies of immunotherapy and molecular target therapy. Here, we aim to review the potential of AI in the integrated analysis of omics data and clinical information with a special focus on recent advances in the discovery of new biomarkers and the future direction of personalized medicine in non-small lung cancer.
引用
收藏
页数:14
相关论文
共 100 条
[1]   Identification of New Hsp90 Inhibitors: Structure Based Virtual Screening, Molecular Dynamic Simulation, Synthesis and Biological Evaluation [J].
Abbasi, Maryam ;
Amanlou, Massoud ;
Aghaei, Mahmoud ;
Hassanzadeh, Farshid ;
Sadeghi-Aliabadi, Hojjat .
ANTI-CANCER AGENTS IN MEDICINAL CHEMISTRY, 2021, 21 (18) :2583-2591
[2]   Geospatial immune variability illuminates differential evolution of lung adenocarcinoma [J].
AbdulJabbar, Khalid ;
Raza, Shan E. Ahmed ;
Rosenthal, Rachel ;
Jamal-Hanjani, Mariam ;
Veeriah, Selvaraju ;
Akarca, Ayse ;
Lund, Tom ;
Moore, David A. ;
Salgado, Roberto ;
Al Bakir, Maise ;
Zapata, Luis ;
Hiley, Crispin T. ;
Officer, Leah ;
Sereno, Marco ;
Smith, Claire Rachel ;
Loi, Sherene ;
Hackshaw, Allan ;
Marafioti, Teresa ;
Quezada, Sergio A. ;
McGranahan, Nicholas ;
Le Quesne, John ;
Swanton, Charles ;
Yuan, Yinyin .
NATURE MEDICINE, 2020, 26 (07) :1054-+
[3]   Reduced Lung-Cancer Mortality with Low-Dose Computed Tomographic Screening [J].
Aberle, Denise R. ;
Adams, Amanda M. ;
Berg, Christine D. ;
Black, William C. ;
Clapp, Jonathan D. ;
Fagerstrom, Richard M. ;
Gareen, Ilana F. ;
Gatsonis, Constantine ;
Marcus, Pamela M. ;
Sicks, JoRean D. .
NEW ENGLAND JOURNAL OF MEDICINE, 2011, 365 (05) :395-409
[4]   The Japanese Lung Cancer Society Guideline for non-small cell lung cancer, stage IV [J].
Akamatsu, Hiroaki ;
Ninomiya, Kiichiro ;
Kenmotsu, Hirotsugu ;
Morise, Masahiro ;
Daga, Haruko ;
Goto, Yasushi ;
Kozuki, Toshiyuki ;
Miura, Satoru ;
Sasaki, Takaaki ;
Tamiya, Akihiro ;
Teraoka, Shunsuke ;
Tsubata, Yukari ;
Yoshioka, Hiroshige ;
Hattori, Yoshihiro ;
Imamura, Chiyo K. ;
Katsuya, Yuki ;
Matsui, Reiko ;
Minegishi, Yuji ;
Mizugaki, Hidenori ;
Nosaki, Kaname ;
Okuma, Yusuke ;
Sakamoto, Setsuko ;
Sone, Takashi ;
Tanaka, Kentaro ;
Umemura, Shigeki ;
Yamanaka, Takeharu ;
Amano, Shinsuke ;
Hasegawa, Kazuo ;
Morita, Satoshi ;
Nakajima, Kazuko ;
Maemondo, Makoto ;
Seto, Takashi ;
Yamamoto, Nobuyuki .
INTERNATIONAL JOURNAL OF CLINICAL ONCOLOGY, 2019, 24 (07) :731-770
[5]   Multimodal genomic features predict outcome of immune checkpoint blockade in non-small-cell lung cancer [J].
Anagnostou, Valsamo ;
Niknafs, Noushin ;
Marrone, Kristen ;
Bruhm, Daniel C. ;
White, James R. ;
Naidoo, Jarushka ;
Hummelink, Karlijn ;
Monkhorst, Kim ;
Lalezari, Ferry ;
Lanis, Mara ;
Rosner, Samuel ;
Reuss, Joshua E. ;
Smith, Kellie N. ;
Adleff, Vilmos ;
Rodgers, Kristen ;
Belcaid, Zineb ;
Rhymee, Lamia ;
Levy, Benjamin ;
Feliciano, Josephine ;
Hann, Christine L. ;
Ettinger, David S. ;
Georgiades, Christos ;
Verde, Franco ;
Illei, Peter ;
Li, Qing Kay ;
Baras, Alexander S. ;
Gabrielson, Edward ;
Brock, Malcolm V. ;
Karchin, Rachel ;
Pardoll, Drew M. ;
Baylin, Stephen B. ;
Brahmer, Julie R. ;
Scharpf, Robert B. ;
Forde, Patrick M. ;
Velculescu, Victor E. .
NATURE CANCER, 2020, 1 (01) :99-+
[7]   Effects of Co-occurring Genomic Alterations on Outcomes in Patients with KRAS-Mutant Non-Small Cell Lung Cancer [J].
Arbour, Kathryn C. ;
Jordan, Emmett ;
Kim, Hyunjae Ryan ;
Dienstag, Jordan ;
Yu, Helena A. ;
Sanchez-Vega, Francisco ;
Lito, Piro ;
Berger, Michael ;
Solit, David B. ;
Hellmann, Matthew ;
Kris, Mark G. ;
Rudin, Charles M. ;
Ni, Ai ;
Arcila, Maria ;
Ladanyi, Marc ;
Riely, Gregory J. .
CLINICAL CANCER RESEARCH, 2018, 24 (02) :334-340
[8]   End-to-end lung cancer screening with three-dimensional deep learning on low-dose chest computed tomography [J].
Ardila, Diego ;
Kiraly, Atilla P. ;
Bharadwaj, Sujeeth ;
Choi, Bokyung ;
Reicher, Joshua J. ;
Peng, Lily ;
Tse, Daniel ;
Etemadi, Mozziyar ;
Ye, Wenxing ;
Corrado, Greg ;
Naidich, David P. ;
Shetty, Shravya .
NATURE MEDICINE, 2019, 25 (06) :954-+
[9]  
Bailey MH, 2018, CELL, V173, P371, DOI [10.1016/j.cell.2018.02.060, 10.1016/j.cell.2018.07.034]
[10]   External validation of a convolutional neural network artificial intelligence tool to predict malignancy in pulmonary nodules [J].
Baldwin, David R. ;
Gustafson, Jennifer ;
Pickup, Lyndsey ;
Arteta, Carlos ;
Novotny, Petr ;
Declerck, Jerome ;
Kadir, Timor ;
Figueiras, Catarina ;
Sterba, Albert ;
Exell, Alan ;
Potesil, Vaclav ;
Holland, Paul ;
Spence, Hazel ;
Clubley, Alison ;
O'Dowd, Emma ;
Clark, Matthew ;
Ashford-Turner, Victoria ;
Callister, Matthew E. J. ;
Gleeson, Fergus, V .
THORAX, 2020, 75 (04) :306-312