Diffusion of glucose in water: A molecular dynamics study

被引:11
作者
Koirala, Rajendra Prasad [1 ]
Dawanse, Sita [1 ]
Pantha, Nurapati [1 ]
机构
[1] Tribhuvan Univ, Cent Dept Phys, Kathmandu, Nepal
关键词
Glucose; Diffusion coefficient; Radial distribution function; Transport properties; Activation energy; SELF-DIFFUSION; ENERGY; COEFFICIENTS; ABSORPTION; TRANSPORT; BRAIN;
D O I
10.1016/j.molliq.2021.117826
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
A glucose molecule, simple structure of carbohydrate, has many functions in our body. It is transported to every cell and served as of energy source. The investigation of transport properties of glucose in aqueous medium would be useful to understand the body metabolism. In this research work, molecular dynamics (MD) simulations have been utilized to study the transport and structural properties of glucose in water at different temperature (298.15 K, 303.15 K, 308.15 K, and 312.15 K). The self diffusion coefficients of glucose and water have been estimated from mean square displacement plot (MSD) by using Einstein's relation. Further, Darken's relation has been used to find the binary diffusion coefficients of the mixture. The structural analysis of the system has been estimated with the help of radial distribution function (RDF) of its constituent atom/molecule pairs. The outcomes from the MD simualtions depicts that the temperature dependence of self diffusion coefficients of solute and solvent follow Arrhenius behavior, which further assist to calculate the activation energy of the system. The results from the present work agree well with the previously reported experimental values. (C) 2021 Elsevier B.V. All rights reserved.
引用
收藏
页数:8
相关论文
共 44 条
[1]  
Abraham M. J., 2018, GROMACS User Manual version 2018
[2]  
Allen M. P., 1991, Computer Simulation of Liquids
[3]   Effect of high glucose concentrations on expression of ELAM-1, VCAM-1 and ICAM-1 in HUVEC with and without cytokine activation [J].
Altannavch, TS ;
Roubalová, K ;
Kucera, P ;
Andel, M .
PHYSIOLOGICAL RESEARCH, 2004, 53 (01) :77-82
[4]  
[Anonymous], 1998, ESSENTIALS CARBOHYDR
[5]  
[Anonymous], Statistical Mechanics
[6]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[7]   The Protein Data Bank [J].
Berman, HM ;
Westbrook, J ;
Feng, Z ;
Gilliland, G ;
Bhat, TN ;
Weissig, H ;
Shindyalov, IN ;
Bourne, PE .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :235-242
[8]   Functional properties of cellulose derivatives to tailor a model sponge cake using rheology and cellular structure analysis [J].
Bousquieres, J. ;
Michon, C. ;
Bonazzi, C. .
FOOD HYDROCOLLOIDS, 2017, 70 :304-312
[9]   Dietary fibre, glycaemic response, and diabetes [J].
Brennan, CS .
MOLECULAR NUTRITION & FOOD RESEARCH, 2005, 49 (06) :560-570
[10]  
Crank J, 1979, The mathematics of diffusion