Nonequilibrium associative retrieval of multiple stored self-assembly targets

被引:21
|
作者
Bisker, Gili [1 ,2 ]
England, Jeremy L. [1 ]
机构
[1] MIT, Dept Phys, Phys Living Syst Grp, Cambridge, MA 02139 USA
[2] Tel Aviv Univ, Fac Engn, Dept Biomed Engn, IL-69978 Tel Aviv, Israel
关键词
nonequilibrium self-assembly; local driving; self-healing; stored structures; RATIONAL DESIGN; PARTICLES; SHAPE; NETWORKS; SYSTEMS; NANOSTRUCTURES; AGGREGATION; COMPONENTS; MOLECULES; PATHWAYS;
D O I
10.1073/pnas.1805769115
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Many biological systems rely on the ability to self-assemble different target structures using the same set of components. Equilibrium self-assembly suffers from a limited capacity in such cases, due to an increasing number of decoy states that grows rapidly with the number of targets encoded. Moreover, improving the kinetic stability of a target at equilibrium carries the price of introducing kinetic traps, leading to slower assembly. Using a toy physical model of interacting particles, we demonstrate that local driving can improve both the assembly time and kinetic stability of multitarget self-assembly, as well as reduce fluctuations around the target configuration. We further show that the local drive can result in a steady-state probability distribution over target structures that deviates from the Boltzmann distribution in a way that depends on the types of interactions that stabilize the targets. Our results illustrate the role that nonequilibrium driving plays in overcoming tradeoffs that are inherent to equilibrium assemblies.
引用
收藏
页码:E10531 / E10538
页数:8
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