Chemical Interactions of Polyethylene Glycols (PEGs) and Glycerol with Protein Functional Groups: Applications to Effects of PEG and Glycerol on Protein Processes

被引:97
作者
Knowles, D. B. [1 ]
Shkel, Irina A. [1 ,2 ]
Phan, Noel M. [1 ]
Sternke, Matt [1 ]
Lingeman, Emily [1 ]
Cheng, Xian [3 ]
Cheng, Lixue [1 ,2 ]
O'Connor, Kevin [1 ]
Record, M. Thomas [1 ,2 ,3 ]
机构
[1] Univ Wisconsin, Dept Biochem, Madison, WI 53706 USA
[2] Univ Wisconsin, Dept Chem, Madison, WI 53706 USA
[3] Univ Wisconsin, Program Biophys, Madison, WI 53706 USA
基金
美国国家卫生研究院;
关键词
PREFERENTIAL INTERACTION; GLYCINE BETAINE; THERMAL-STABILITY; UREA; SOLUBILITY; BINDING; SURFACE; SALTS; STABILIZATION; COEFFICIENTS;
D O I
10.1021/acs.biochem.5b00246
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In this work, we obtain the data needed to predict chemical interactions of polyethylene glycols (PECs) and glycerol with proteins and related organic compounds and thereby interpret or predict chemical effects of pEGs on protein processes. To accomplish this, we determine interactions of glycerol and tetraEG with >30 model compounds displaying the major C, N, and O functional groups of proteins. Analysis of these data yields coefficients (alpha values) that quantify interactions of glycerol, tetraEG, and PEG end (-CH2OH) and intetior (-CH2OCH2-) groups with these groups, relative to interactions with water. TetraEG (strongly) and glycerol (weakly) interact favorably with aromatic C, amide N, and cationic N, but unfavorably with amide O, carboxylate O, and salt ions. Strongly unfavorable O and salt anion interactions help make both small and large PEGs effective protein precipitants. Interactions of tetraEG and PEG interior groups with aliphatic C are quite favorable, while interactions of glycerol and PEG end groups with aliphatic C are not. Hence, tetraEG and PEG300 favor unfolding of the DNA-binding domain of lac repressor (lacDBD), while glycerol and di- and monoethylene glycol are stabilizers. Favorable interactions with aromatic and aliphatic C explain why PEG400 greatly increases the solubility of aromatic hydrocarbons and steroids. PEG400-steroid interactions are unusually favorable, presumably because of simultaneous interactions of multiple PEG interior groups with the fused ring system of the steroid. Using alpha values reported here, chemical contributions to PEG m-values can be predicted or interpreted in terms of changes in water-accessible surface area (Delta ASA) and separated from excluded volume effects.
引用
收藏
页码:3528 / 3542
页数:15
相关论文
共 61 条
[1]   Aqueous two-phase systems for protein separation: A perspective [J].
Asenjo, Juan A. ;
Andrews, Barbara A. .
JOURNAL OF CHROMATOGRAPHY A, 2011, 1218 (49) :8826-8835
[2]   Osmolyte effects on protein stability and solubility: A balancing act between backbone and side-chains [J].
Auton, Matthew ;
Roesgen, Joerg ;
Sinev, Mikhail ;
Holthauzen, Luis Marcelo F. ;
Bolen, D. Wayne .
BIOPHYSICAL CHEMISTRY, 2011, 159 (01) :90-99
[3]   INCREASED THERMAL-STABILITY OF PROTEINS IN THE PRESENCE OF SUGARS AND POLYOLS [J].
BACK, JF ;
OAKENFULL, D ;
SMITH, MB .
BIOCHEMISTRY, 1979, 18 (23) :5191-5196
[4]   Unexpected Effects of Macromolecular Crowding on Protein Stability [J].
Benton, Laura A. ;
Smith, Austin E. ;
Young, Gregory B. ;
Pielak, Gary J. .
BIOCHEMISTRY, 2012, 51 (49) :9773-9775
[5]   Osmosis-Based Pressure Generation: Dynamics and Application [J].
Bruhn, Brandon R. ;
Schroeder, Thomas B. H. ;
Li, Suyi ;
Billeh, Yazan N. ;
Wang, K. W. ;
Mayer, Michael .
PLOS ONE, 2014, 9 (03)
[6]   Urea-amide preferential interactions in water: Quantitative comparison of model compound data with biopolymer results using water accessible surface areas [J].
Cannon, Jonathan G. ;
Anderson, Charles F. ;
Record, M. Thomas, Jr. .
JOURNAL OF PHYSICAL CHEMISTRY B, 2007, 111 (32) :9675-9685
[7]  
CAO DF, 2002, THESIS U PITTSBURGH
[8]   Interactions of the Osmolyte Glycine Betaine with Molecular Surfaces in Water: Thermodynamics, Structural Interpretation, and Prediction of m-Values [J].
Capp, Michael W. ;
Pegram, Laurel M. ;
Saecker, Ruth M. ;
Kratz, Megan ;
Riccardi, Demian ;
Wendorff, Timothy ;
Cannon, Jonathan G. ;
Record, M. Thomas, Jr. .
BIOCHEMISTRY, 2009, 48 (43) :10372-10379
[9]   Interpreting the effects of small uncharged solutes on protein-folding equilibria [J].
Davis-Searles, PR ;
Saunders, AJ ;
Erie, DA ;
Winzor, DJ ;
Pielak, GJ .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 2001, 30 :271-306
[10]   Quantifying Additive Interactions of the Osmolyte Proline with Individual Functional Groups of Proteins: Comparisons with Urea and Glycine Betaine, Interpretation of m-Values [J].
Diehl, Roger C. ;
Guinn, Emily J. ;
Capp, Michael W. ;
Tsodikov, Oleg V. ;
Record, M. Thomas, Jr. .
BIOCHEMISTRY, 2013, 52 (35) :5997-6010