共 159 条
Challenges of the practical applications of solid-state nanopore platforms for sensing biomolecules
被引:3
作者:

论文数: 引用数:
h-index:
机构:
机构:
[1] Osaka Univ, SANKEN, 8-1 Mihogaoka, Osaka 5670047, Japan
关键词:
nanopore;
biomolecule;
single-molecules;
machine learning;
deep learning;
ion transport;
electrical measurements;
SINGLE-STRANDED-DNA;
GRAPHENE NANORIBBON;
TRANSLOCATION DYNAMICS;
THERMAL AGITATION;
CURRENT SIGNALS;
PROTEIN PORES;
NOISE;
IDENTIFICATION;
MOLECULES;
TRANSPORT;
D O I:
10.35848/1882-0786/ac7bd4
中图分类号:
O59 [应用物理学];
学科分类号:
摘要:
Nanopores are cost-effective digital platforms, which can rapidly detect and identify biomolecules at the single-molecule level with high accuracy via the changes in ionic currents. Furthermore, nanoscale deoxyribonucleic acid and proteins, as well as viruses and bacteria that are as small as several hundred nanometers and several microns, respectively, can be detected and identified by optimizing the diameters of a nanopore according to the sample molecule. Thus, this review presents an overview of the methods for fabricating nanopores, as well as their electrical properties, followed by an overview of the transport properties of ions and analyte molecules and the methods for electrical signal analysis. Thus, this review addresses the challenges of the practical application of nanopores and the countermeasures for mitigating them, thereby accelerating the construction of digital networks to secure the safety, security, and health of people globally.
引用
收藏
页数:14
相关论文
共 159 条
[1]
Wettability and surface charge of Si3N4-bioglass composites in contact with simulated physiological liquids
[J].
Amaral, M
;
Lopes, MA
;
Santos, JD
;
Silva, RF
.
BIOMATERIALS,
2002, 23 (20)
:4123-4129

论文数: 引用数:
h-index:
机构:

Lopes, MA
论文数: 0 引用数: 0
h-index: 0
机构: INEB, Lab Biomat, P-4150 Oporto, Portugal

Santos, JD
论文数: 0 引用数: 0
h-index: 0
机构: INEB, Lab Biomat, P-4150 Oporto, Portugal

论文数: 引用数:
h-index:
机构:
[2]
Solid-State Nanopore Platform Integrated with Machine Learning for Digital Diagnosis of Virus Infection
[J].
Arima, Akihide
;
Tsutsui, Makusu
;
Washio, Takashi
;
Baba, Yoshinobu
;
Kawai, Tomoji
.
ANALYTICAL CHEMISTRY,
2021, 93 (01)
:215-227

Arima, Akihide
论文数: 0 引用数: 0
h-index: 0
机构:
Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan

Tsutsui, Makusu
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan

Washio, Takashi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan

Baba, Yoshinobu
论文数: 0 引用数: 0
h-index: 0
机构:
Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan
Nagoya Univ, Inst NanoLife Syst, Inst Innovat Future Soc, Nagoya, Aichi 4648603, Japan
Natl Inst Quantum & Radiol Sci & Technol, Inst Quantum Life Sci, Inage Ku, Chiba 2638555, Japan Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan

Kawai, Tomoji
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan
[3]
Digital Pathology Platform for Respiratory Tract Infection Diagnosis via Multiplex Single-Particle Detections
[J].
Arima, Akihide
;
Tsutsui, Makusu
;
Yoshida, Takeshi
;
Tatematsu, Kenji
;
Yamazaki, Tomoko
;
Yokota, Kazumichi
;
Kuroda, Shun'ichi
;
Washio, Takashi
;
Baba, Yoshinobu
;
Kawai, Tomoji
.
ACS SENSORS,
2020, 5 (11)
:3398-3403

Arima, Akihide
论文数: 0 引用数: 0
h-index: 0
机构:
Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Tsutsui, Makusu
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Yoshida, Takeshi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Tatematsu, Kenji
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Yamazaki, Tomoko
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Yokota, Kazumichi
论文数: 0 引用数: 0
h-index: 0
机构:
Natl Inst Adv Ind Sci & Technol, Takamatsu, Kagawa 7610395, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

Washio, Takashi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Baba, Yoshinobu
论文数: 0 引用数: 0
h-index: 0
机构:
Nagoya Univ, Grad Sch Engn, Dept Biomol Engn, Nagoya, Aichi 4648603, Japan
Nagoya Univ, Inst Nano Life Syst, Inst Innovat Future Soc, Nagoya, Aichi 4648603, Japan
Natl Inst Quantum & Radiol Sci & Technol, Inst Quantum Life Sci, Chiba 2638555, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan

Kawai, Tomoji
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, Osaka 5670047, Japan
[4]
Identifying Single Viruses Using Biorecognition Solid-State Nanopores
[J].
Arima, Akihide
;
Harlisa, Ilva Hanun
;
Yoshida, Takeshi
;
Tsutsui, Makusu
;
Tanaka, Masayoshi
;
Yokota, Kazumichi
;
Tonomura, Wataru
;
Yasuda, Jiro
;
Taniguchi, Masateru
;
Washio, Takashi
;
Okochi, Mina
;
Kawai, Tomoji
.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY,
2018, 140 (48)
:16834-16841

Arima, Akihide
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

Harlisa, Ilva Hanun
论文数: 0 引用数: 0
h-index: 0
机构:
Tokyo Inst Technol, Dept Chem Sci & Engn, Sch Mat & Chem Technol, Meguro Ku, 2-12-1 O Okayama, Tokyo 1528552, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

Yoshida, Takeshi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

Tsutsui, Makusu
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

Yokota, Kazumichi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

Tonomura, Wataru
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

论文数: 引用数:
h-index:
机构:

Washio, Takashi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

Kawai, Tomoji
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan
[5]
Selective detections of single-viruses using solid-state nanopores
[J].
Arima, Akihide
;
Tsutsui, Makusu
;
Harlisa, Ilva Hanun
;
Yoshida, Takeshi
;
Tanaka, Masayoshi
;
Yokota, Kazumichi
;
Tonomura, Wataru
;
Taniguchi, Masateru
;
Okochi, Mina
;
Washio, Takashi
;
Kawai, Tomoji
.
SCIENTIFIC REPORTS,
2018, 8

Arima, Akihide
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

Tsutsui, Makusu
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

Harlisa, Ilva Hanun
论文数: 0 引用数: 0
h-index: 0
机构:
Tokyo Inst Technol, Sch Mat & Chem Technol, Dept Chem Sci & Engn, Meguro Ku, 2-12-1 O Okayama, Tokyo 1528552, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

Yoshida, Takeshi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

Yokota, Kazumichi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

Tonomura, Wataru
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

论文数: 引用数:
h-index:
机构:

论文数: 引用数:
h-index:
机构:

Washio, Takashi
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan

Kawai, Tomoji
论文数: 0 引用数: 0
h-index: 0
机构:
Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan Osaka Univ, Inst Sci & Ind Res, 8-1 Mihogaoka, Osaka 5670047, Japan
[6]
MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
[J].
Ashton, Philip M.
;
Nair, Satheesh
;
Dallman, Tim
;
Rubino, Salvatore
;
Rabsch, Wolfgang
;
Mwaigwisya, Solomon
;
Wain, John
;
O'Grady, Justin
.
NATURE BIOTECHNOLOGY,
2015, 33 (03)
:296-+

Ashton, Philip M.
论文数: 0 引用数: 0
h-index: 0
机构:
Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Nair, Satheesh
论文数: 0 引用数: 0
h-index: 0
机构:
Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Dallman, Tim
论文数: 0 引用数: 0
h-index: 0
机构:
Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Rubino, Salvatore
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Sassari, Dept Biomed Sci, I-07100 Sassari, Italy
King Faisal Specialist Hosp & Res Ctr, Dept Infect & Immun, Riyadh 11211, Saudi Arabia Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Rabsch, Wolfgang
论文数: 0 引用数: 0
h-index: 0
机构:
Robert Koch Inst, Natl Reference Ctr Salmonellae & Other Enter, Wernigerode, Germany Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Mwaigwisya, Solomon
论文数: 0 引用数: 0
h-index: 0
机构:
Univ E Anglia, Norwich Med Sch, Norwich NR4 7TJ, Norfolk, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

Wain, John
论文数: 0 引用数: 0
h-index: 0
机构:
Univ E Anglia, Norwich Med Sch, Norwich NR4 7TJ, Norfolk, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England

O'Grady, Justin
论文数: 0 引用数: 0
h-index: 0
机构:
Univ E Anglia, Norwich Med Sch, Norwich NR4 7TJ, Norfolk, England Publ Hlth England, Gastrointestinal Bacteria Reference Unit, London, England
[7]
Fabrication of Low Noise Borosilicate Glass Nanopores for Single Molecule Sensing
[J].
Bafna, Jayesh A.
;
Soni, Gautam V.
.
PLOS ONE,
2016, 11 (06)

Bafna, Jayesh A.
论文数: 0 引用数: 0
h-index: 0
机构:
Raman Res Inst, Bangalore 560080, Karnataka, India Raman Res Inst, Bangalore 560080, Karnataka, India

Soni, Gautam V.
论文数: 0 引用数: 0
h-index: 0
机构:
Raman Res Inst, Bangalore 560080, Karnataka, India Raman Res Inst, Bangalore 560080, Karnataka, India
[8]
Quantifying Short-Lived Events in Multistate Ionic Current Measurements
[J].
Balijepalli, Arvind
;
Ettedgui, Jessica
;
Cornio, Andrew T.
;
Robertson, Joseph W. F.
;
Cheung, Kin P.
;
Kasianowicz, John J.
;
Vaz, Canute
.
ACS NANO,
2014, 8 (02)
:1547-1553

Balijepalli, Arvind
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Ettedgui, Jessica
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Cornio, Andrew T.
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Robertson, Joseph W. F.
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Cheung, Kin P.
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Kasianowicz, John J.
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA

Vaz, Canute
论文数: 0 引用数: 0
h-index: 0
机构:
NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA NIST, Phys Measurement Lab, Gaithersburg, MD 20899 USA
[9]
Slowing DNA Transport Using Graphene-DNA Interactions
[J].
Banerjee, Shouvik
;
Wilson, James
;
Shim, Jiwook
;
Shankla, Manish
;
Corbin, Elise A.
;
Aksimentiev, Aleksei
;
Bashir, Rashid
.
ADVANCED FUNCTIONAL MATERIALS,
2015, 25 (06)
:936-946

Banerjee, Shouvik
论文数: 0 引用数: 0
h-index: 0
机构:
Micro & Nanotechnol Lab, Urbana, IL 61801 USA
Univ Illinois, Dept Mat Sci & Engn, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Wilson, James
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Illinois, Dept Phys, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Shim, Jiwook
论文数: 0 引用数: 0
h-index: 0
机构:
Micro & Nanotechnol Lab, Urbana, IL 61801 USA
Univ Illinois, Dept Elect & Comp Engn, Urbana, IL 61801 USA
Univ Illinois, Dept Bioengn, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Shankla, Manish
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Illinois, Ctr Biophys & Computat Biol, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Corbin, Elise A.
论文数: 0 引用数: 0
h-index: 0
机构:
Micro & Nanotechnol Lab, Urbana, IL 61801 USA
Univ Illinois, Dept Bioengn, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Aksimentiev, Aleksei
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Illinois, Dept Phys, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA

Bashir, Rashid
论文数: 0 引用数: 0
h-index: 0
机构:
Micro & Nanotechnol Lab, Urbana, IL 61801 USA
Univ Illinois, Dept Elect & Comp Engn, Urbana, IL 61801 USA
Univ Illinois, Dept Bioengn, Urbana, IL 61801 USA Micro & Nanotechnol Lab, Urbana, IL 61801 USA
[10]
Stochastic sensors inspired by biology
[J].
Bayley, H
;
Cremer, PS
.
NATURE,
2001, 413 (6852)
:226-230

Bayley, H
论文数: 0 引用数: 0
h-index: 0
机构:
Texas A&M Univ, Dept Med Biochem & Genet, Hlth Sci Ctr, College Stn, TX 77843 USA Texas A&M Univ, Dept Med Biochem & Genet, Hlth Sci Ctr, College Stn, TX 77843 USA

Cremer, PS
论文数: 0 引用数: 0
h-index: 0
机构: Texas A&M Univ, Dept Med Biochem & Genet, Hlth Sci Ctr, College Stn, TX 77843 USA