Local and tunable n→π* interactions regulate amide isomerism in the peptoid backbone

被引:184
作者
Gorske, Benjamin C. [1 ]
Bastian, Brent L. [1 ]
Geske, Grant D. [1 ]
Blackwell, Helen E. [1 ]
机构
[1] Univ Wisconsin, Dept Chem, Madison, WI 53706 USA
关键词
D O I
10.1021/ja071310l
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
We report that n ->pi* interactions are operative in peptoids and play a major role in controlling amide isomerism. These interactions can be tuned using alpha-chiral amide side chains known to promote peptoid folding. To our knowledge, this is the first report of n ->pi* interactions between amides in non-prolyl systems. Furthermore, we have characterized an n ->pi* interaction between backbone carbonyls and side chain aromatic rings that can dramatically stabilize the cis-amides required for peptoid helix formation. The tunability of both types of n ->pi* interactions in peptoids has significant implications for peptoid folding and could be exploited for the design of new peptoid architectures.
引用
收藏
页码:8928 / +
页数:3
相关论文
共 14 条
[1]   NMR determination of the major solution conformation of a peptoid pentamer with chiral side chains [J].
Armand, P ;
Kirshenbaum, K ;
Goldsmith, RA ;
Farr-Jones, S ;
Barron, AE ;
Truong, KTV ;
Dill, KA ;
Mierke, DF ;
Cohen, FE ;
Zuckermann, RN ;
Bradley, EK .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (08) :4309-4314
[2]   Lone pair-aromatic interactions: To stabilize or not to stabilize [J].
Egli, Martin ;
Sarkhel, Sanjay .
ACCOUNTS OF CHEMICAL RESEARCH, 2007, 40 (03) :197-205
[3]   Expedient synthesis and design strategies for new peptoid construction [J].
Gorske, BC ;
Jewell, SA ;
Guerard, EJ ;
Blackwell, HE .
ORGANIC LETTERS, 2005, 7 (08) :1521-1524
[4]   Tuning peptoid secondary structure with pentafluoroaromatic functionality: A new design paradigm for the construction of discretely folded peptoid structures [J].
Gorske, Benjamin C. ;
Blackwell, Helen E. .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (44) :14378-14387
[5]   Energetics of an n→π* interaction that impacts protein structure [J].
Hodges, Jonathan A. ;
Raines, Ronald T. .
ORGANIC LETTERS, 2006, 8 (21) :4695-4697
[6]   Stereoelectronic effects on polyproline conformation [J].
Horng, JC ;
Raines, RT .
PROTEIN SCIENCE, 2006, 15 (01) :74-83
[7]   Azidoproline containing helices:: Stabilization of the polyproline II structure by a functionalizable group [J].
Kuemin, Michael ;
Sonntag, Louis-Sebastian ;
Wennemers, Helma .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2007, 129 (03) :466-467
[8]  
PATCH JA, 2004, PSEUDOPEPTIDES DRUG
[9]   Intramolecular noncovalent force in cyclic amidines: nonbonded interaction between carbon atoms and heteroatoms [J].
Qian, XH ;
Xu, XY ;
Li, ZB ;
Frontera, A .
CHEMICAL PHYSICS LETTERS, 2003, 372 (3-4) :489-496
[10]   The "azido gauche effect"-implications for the conformation of azidoprolines [J].
Sonntag, Louis-Sebastian ;
Schweizer, Sabine ;
Ochsenfeld, Christian ;
Wennemers, Helma .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2006, 128 (45) :14697-14703