Segmentation of Multiple Myeloma Plasma Cells in Microscopy Images with Noisy Labels

被引:2
作者
Faura, Alvaro Garcia [1 ]
Stepec, Dejan [1 ,2 ]
Martincic, Tomaz [1 ,2 ]
Skocaj, Danijel [2 ]
机构
[1] XLAB Doo, Pot Za Brdom 100, Ljubljana 1000, Slovenia
[2] Univ Ljubljana, Fac Comp & Informat Sci, Vecna Pot 113, Ljubljana 1000, Slovenia
来源
MEDICAL IMAGING 2022: COMPUTER-AIDED DIAGNOSIS | 2022年 / 12033卷
关键词
multiple myeloma; plasma cell segmentation; semi-automated labeling; noisy labels; data augmentation; instance segmentation; deep learning;
D O I
10.1117/12.2607458
中图分类号
R318 [生物医学工程];
学科分类号
0831 ;
摘要
A key component towards an improved and fast cancer diagnosis is the development of computer-assisted tools. In this article, we present the solution that won the SegPC-2021 competition* for the segmentation of Multiple Myeloma (MM) plasma cells in microscopy images. The labels used in the competition dataset were generated semi-automatically and presented noise. To deal with it, a heavy image augmentation procedure was carried out, available labels were leveraged in a domain-specific manner, and predictions from several models were combined using a custom ensemble strategy. State-of-the-art feature extractors and instance segmentation architectures were used, resulting in a mean Intersection-over-Union of 0.9389 on the SegPC-2021 final test set.
引用
收藏
页数:8
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