Expression profiling of microRNAs in human bone tissue from postmenopausal women

被引:16
|
作者
De-Ugarte, Laura [1 ]
Serra-Vinardell, Jenny [2 ]
Nonell, Lara [3 ]
Balcells, Susana [2 ]
Arnal, Magdalena [3 ]
Nogues, Xavier [1 ]
Mellibovsky, Leonardo [1 ]
Grinberg, Daniel [2 ]
Diez-Perez, Adolfo [1 ]
Garcia-Giralt, Natalia [1 ]
机构
[1] IMIM Hosp del Mar, Musculoskeletal Res Grp, Ctr Invest Biomed Red Fragilidad & Envejecimiento, Med Res Inst,ISCIII, C Dr Aiguader 88, Barcelona 08003, Spain
[2] Univ Barcelona, Dept Genet Microbiol & Stat, Ctr Invest Biomed Red Enfermedades Raras CIBERER, Fac Biol,IBUB,IRSJD,ISCIII, Barcelona, Spain
[3] IMIM Hosp del Mar, Microarray Anal Serv, Med Res Inst, Barcelona, Spain
来源
HUMAN CELL | 2018年 / 31卷 / 01期
关键词
MicroRNA; Microarrays; Bone tissue; Osteoblast; Osteoclast; HEPATIC STELLATE CELLS; MESENCHYMAL STEM-CELLS; OSTEOGENIC DIFFERENTIATION; OSTEOSARCOMA CELLS; SUPPRESSES PROLIFERATION; HEPATOCELLULAR-CARCINOMA; MALIGNANT PHENOTYPE; SIGNALING PATHWAY; CERVICAL-CANCER; DOWN-REGULATION;
D O I
10.1007/s13577-017-0181-y
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Bone tissue is composed of several cell types, which express their own microRNAs (miRNAs) that will play a role in cell function. The set of total miRNAs expressed in all cell types configures the specific signature of the bone tissue in one physiological condition. The aim of this study was to explore the miRNA expression profile of bone tissue from postmenopausal women. Tissue was obtained from trabecular bone and was analyzed in fresh conditions (n = 6). Primary osteoblasts were also obtained from trabecular bone (n = 4) and human osteoclasts were obtained from monocyte precursors after in vitro differentiation (n = 5). MicroRNA expression profiling was obtained for each sample by microarray and a global miRNA analysis was performed combining the data acquired in all the microarray experiments. From the 641 miRNAs detected in bone tissue samples, 346 (54%) were present in osteoblasts and/or osteoclasts. The other 46% were not identified in any of the bone cells analyzed. Intersection of osteoblast and osteoclast arrays identified 101 miRNAs shared by both cell types, which accounts for 30-40% of miRNAs detected in these cells. In osteoblasts, 266 miRNAs were detected, of which 243 (91%) were also present in the total bone array, representing 38% of all bone miRNAs. In osteoclasts, 340 miRNAs were detected, of which 196 (58%) were also present in the bone tissue array, representing 31% of all miRNAs detected in total bone. These analyses provide an overview of miRNAs expressed in bone tissue, broadening our knowledge in the microRNA field.
引用
收藏
页码:33 / 41
页数:9
相关论文
共 50 条
  • [1] Expression profiling of microRNAs in human bone tissue from postmenopausal women
    Laura De-Ugarte
    Jenny Serra-Vinardell
    Lara Nonell
    Susana Balcells
    Magdalena Arnal
    Xavier Nogues
    Leonardo Mellibovsky
    Daniel Grinberg
    Adolfo Diez-Perez
    Natalia Garcia-Giralt
    Human Cell, 2018, 31 : 33 - 41
  • [2] The expression and function of microRNAs in bone homeostasis
    Pi, Caixia
    Li, Yi-Ping
    Zhou, Xuedong
    Gao, Bo
    FRONTIERS IN BIOSCIENCE-LANDMARK, 2015, 20 : 119 - 138
  • [3] Comparative profile of exosomal microRNAs in postmenopausal women with various bone mineral densities by small RNA sequencing
    Kong, Dece
    Chen, Tianning
    Zheng, Xinhui
    Yang, Tieyi
    Zhang, Yan
    Shao, Jin
    GENOMICS, 2021, 113 (03) : 1514 - 1521
  • [4] Bone and muscle specific circulating microRNAs in postmenopausal women based on osteoporosis and sarcopenia status
    Chen, Zhaojing
    Bemben, Michael G.
    Bemben, Debra A.
    BONE, 2019, 120 : 271 - 278
  • [5] Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska, Agnieszka
    Anthon, Christian
    Bak, Mads
    Tommerup, Niels
    Skovgaard, Kerstin
    Heegaard, Peter M. H.
    Gorodkin, Jan
    Cirera, Susanna
    Fredholm, Merete
    BMC GENOMICS, 2012, 13
  • [6] Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Agnieszka Podolska
    Christian Anthon
    Mads Bak
    Niels Tommerup
    Kerstin Skovgaard
    Peter MH Heegaard
    Jan Gorodkin
    Susanna Cirera
    Merete Fredholm
    BMC Genomics, 13
  • [7] Expression profiling of microRNAs by deep sequencing
    Creighton, Chad J.
    Reid, Jeffrey G.
    Gunaratne, Preethi H.
    BRIEFINGS IN BIOINFORMATICS, 2009, 10 (05) : 490 - 497
  • [8] Identification and expression profiling of microRNAs in Hymenolepis
    Macchiaroli, Natalia
    Cucher, Marcela
    Kamenetzky, Laura
    Yones, Cristian
    Bugnon, Leandro
    Berriman, Matt
    Olson, Peter D.
    Cecilia Rosenzvit, Mara
    INTERNATIONAL JOURNAL FOR PARASITOLOGY, 2019, 49 (3-4) : 211 - 223
  • [9] Comprehensive expression profiling of microRNAs in laryngeal squamous cell carcinoma
    Cao, Pengyu
    Zhou, Liang
    Zhang, Jin
    Zheng, Fengyun
    Wang, Huijun
    Ma, Duan
    Tian, Jie
    HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK, 2013, 35 (05): : 720 - 728
  • [10] Deregulated microRNAs and Adiponectin in Postmenopausal Women with Breast Cancer
    Isabel Pena-Cano, Maria
    Saucedo, Renata
    Morales-Avila, Enrique
    Valencia, Jorge
    Zavala-Moha, Jose A.
    Lopez, Adriana
    GYNECOLOGIC AND OBSTETRIC INVESTIGATION, 2019, 84 (04) : 369 - 377