Long non-coding RNAs in development and disease: conservation to mechanisms

被引:142
|
作者
Tsagakis, Ioannis [1 ,2 ]
Douka, Katerina [1 ,2 ]
Birds, Isabel [1 ,2 ]
Aspden, Julie L. [1 ,2 ]
机构
[1] Univ Leeds, Sch Mol & Cellular Biol, Fac Biol Sci, Leeds LS2 9JT, W Yorkshire, England
[2] Univ Leeds, LeedsOm, Leeds, W Yorkshire, England
来源
JOURNAL OF PATHOLOGY | 2020年 / 250卷 / 05期
基金
英国生物技术与生命科学研究理事会;
关键词
long non-coding RNA; long intergenic non-coding RNA; anti-sense lncRNAs; translation; conservation; stem cells; development; X chromosome inactivation; neurodegenerative disease; cancer; diabetes; XIST RNA; CHROMOSOMAL LOCALIZATION; NUCLEAR-LOCALIZATION; BC200; RNA; HNRNP U; GENE; EXPRESSION; TRANSLATION; EVOLUTION; CANCER;
D O I
10.1002/path.5405
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Our genomes contain the blueprint of what makes us human and many indications as to why we develop disease. Until the last 10 years, most studies had focussed on protein-coding genes, more specifically DNA sequences coding for proteins. However, this represents less than 5% of our genomes. The other 95% is referred to as the 'dark matter' of our genomes, our understanding of which is extremely limited. Part of this 'dark matter' includes regions that give rise to RNAs that do not code for proteins. A subset of these non-coding RNAs are long non-coding RNAs (lncRNAs), which in particular are beginning to be dissected and their importance to human health revealed. To improve our understanding and treatment of disease it is vital that we understand the molecular and cellular function of lncRNAs, and how their misregulation can contribute to disease. It is not yet clear what proportion of lncRNAs is actually functional; conservation during evolution is being used to understand the biological importance of lncRNA. Here, we present key themes within the field of lncRNAs, emphasising the importance of their roles in both the nucleus and the cytoplasm of cells, as well as patterns in their modes of action. We discuss their potential functions in development and disease using examples where we have the greatest understanding. Finally, we emphasise why lncRNAs can serve as biomarkers and discuss their emerging potential for therapy. (c) 2020 The Authors. The Journal of Pathology published by John Wiley & Sons Ltd on behalf of Pathological Society of Great Britain and Ireland.
引用
收藏
页码:480 / 495
页数:16
相关论文
共 50 条
  • [31] Long Non-coding RNAs in Human Disease Preface
    Morris, Kevin V.
    LONG NON-CODING RNAS IN HUMAN DISEASE, 2016, 394 : V - V
  • [32] Long Non-Coding RNAs in Alzheimer's Disease
    Zhang, Zijian
    CURRENT TOPICS IN MEDICINAL CHEMISTRY, 2016, 16 (05) : 511 - 519
  • [33] Roles for long non-coding RNAs in physiology and disease
    Melissari, Maria-Theodora
    Grote, Phillip
    PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY, 2016, 468 (06): : 945 - 958
  • [34] A Role for Long Non-Coding RNAs in Atherosclerosis Development
    Sallam, Tamer
    Jones, Marius
    Thomas, Gilliland
    Wu, Xiaohui
    Tontonoz, Peter
    CIRCULATION, 2016, 134
  • [35] Long Non-coding RNAs in Parkinson’s Disease
    Chengqi Xin
    Jing Liu
    Neurochemical Research, 2021, 46 : 1031 - 1042
  • [36] Genetic variation in the non-coding genome: Involvement of micro-RNAs and long non-coding RNAs in disease
    Hrdlickova, Barbara
    de Almeida, Rodrigo Coutinho
    Borek, Zuzanna
    Withoff, Sebo
    BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR BASIS OF DISEASE, 2014, 1842 (10): : 1910 - 1922
  • [37] Molecular mechanisms of intron retention in Long Non-Coding RNAs
    Grammatikakis, Ioannis
    Behera, Amit
    Hartford, Corrine Corrina R.
    Pehrsson, Erica C.
    Li, XiaoLing
    Zhao, Yongmei
    Shrethsa, Biraj
    Brownmiller, Tayvia
    Caplen, Natasha J.
    Prasanth, Kannanganattu V.
    Gonatopoulos-Pournatzis, Thomas
    Lal, Ashish
    MOLECULAR CANCER THERAPEUTICS, 2024, 23 (11)
  • [38] Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer
    Yiwen Fang
    Melissa J.Fullwood
    Genomics,Proteomics & Bioinformatics, 2016, 14 (01) : 42 - 54
  • [39] Mechanisms of Long Non-Coding RNAs in Cancers and Their Dynamic Regulations
    Zhang, Xiao-Zhen
    Liu, Hao
    Chen, Su-Ren
    CANCERS, 2020, 12 (05)
  • [40] Roles, Functions, and Mechanisms of Long Non-coding RNAs in Cancer
    Yiwen Fang
    Melissa JFullwood
    Genomics,Proteomics & Bioinformatics, 2016, (01) : 42 - 54