Prognostic Assessment of Oxidative Stress-Related Genes in Colorectal Cancer and New Insights into Tumor Immunity

被引:7
作者
Chen, Zilu [1 ]
Mei, Kun [2 ]
Xiao, Yao [1 ]
Xiong, Yan [1 ]
Long, Wei [1 ]
Wang, Qin [1 ]
Zhong, Jiang [3 ]
Di, Dongmei [2 ]
Ge, Yunxi [3 ]
Luo, Yi [4 ,5 ]
Li, Ziyun [1 ,6 ]
Huang, Yan [3 ]
Gu, Renjun [1 ,7 ,8 ]
Wang, Bin [2 ]
机构
[1] Nanjing Univ Chinese Med, Nanjing 210023, Peoples R China
[2] Soochow Univ, Dept Cardiothorac Surg, Affiliated Hosp 3, Changzhou 213003, Peoples R China
[3] Nanjing Univ Chinese Med, Dept Ultrasound, Nanjing Hosp Chinese Med, Nanjing 210001, Peoples R China
[4] Nanjing Univ Chinese Med, Integrated Tradit Chinese & Western Med, Dept Oncol, Affiliated Hosp, Nanjing 210028, Jiangsu, Peoples R China
[5] Jiangsu Prov Hosp Integrat Chinese & Western Med, Dept Oncol, Nanjing 210028, Jiangsu, Peoples R China
[6] Nanjing Univ Chinese Med, Sch Acupuncture & Tuina, Sch Regimen & Rehabil, Nanjing 210023, Peoples R China
[7] Nanjing Univ Chinese Med, Sch Chinese Med, Nanjing 210023, Peoples R China
[8] Nanjing Univ Chinese Med, Sch Integrated Chinese & Western Med, Nanjing 210023, Peoples R China
基金
中国国家自然科学基金;
关键词
Cancer patients - Colon cancer - Cox regression analysis - Forecasting models - Model-based OPC - Stress potential - Stress-related gene - Training sets - Transcriptomes - Tumor immunities;
D O I
10.1155/2022/2518340
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Oxidative stress is crucial to the biology of tumors. Oxidative stress' potential predictive significance in colorectal cancer (CRC) has not been studied; nevertheless here, we developed a forecasting model based on oxidative stress to forecast the result of CRC survival and enhance clinical judgment. The training set was chosen from the transcriptomes of 177 CRC patients in GSE17536. For validation, 65 samples of colon cancer from GSE29621 were utilized. For the purpose of choosing prognostic genes, the expression of oxidative stress-related genes (OXEGs) was found. Prognostic risk models were built using multivariate Cox regression analysis, univariate Cox regression analysis, and LASSO regression analysis. The outcomes of the western blot and transcriptome sequencing tests were finally confirmed. ATF4, CARS2, CRP, GPX1, IL1B, MAPK8, MRPL44, MTFMT, NOS1, OSGIN2, SOD2, AARS2, and FOXO3 were among the 14 OXEGs used to build prognostic characteristics. Patients with CRC were categorized into low-risk and high-risk groups according on their median risk scores. Cox regression analysis using single and multiple variables revealed that OXEG-related signals were independent risk factors for CRC. Additionally, the validation outcomes from western blotting and transcriptome sequencing demonstrated that OXEGs were differently expressed. Using 14 OXEGs, our work creates a predictive signature that may be applied to the creation of new prognostic models and the identification of possible medication candidates for the treatment of CRC.
引用
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页数:19
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