A Simple Method for DNA Extraction from Activated Sludge

被引:0
|
作者
Singka, Dounghatai [1 ]
Kumdhitiahutsawakul, Ladapa [2 ]
Rekkriangkrai, Prasert [2 ]
Pathom-aree, Wasu [1 ]
机构
[1] Chiang Mai Univ, Dept Biol, Fac Sci, Chiang Mai 50200, Thailand
[2] Chiang Mai Univ, Energy Res & Dev Inst Nakornping, Chiang Mai 50200, Thailand
来源
CHIANG MAI JOURNAL OF SCIENCE | 2012年 / 39卷 / 01期
关键词
Activated sludge; DNA extraction; DGGE; Archaeal population; GRADIENT GEL-ELECTROPHORESIS; WASTE-WATER TREATMENT; ENVIRONMENTAL DNA; PURIFICATION; SOIL;
D O I
暂无
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
A protocol for DNA extraction directly from activated sludge is described. Sludge samples were lysed by glass bead and CTAB. The extracted DNA was purified with phenol: chloroform: isoamyl alcohol mixture and precipitated in sodium acetate and isopropanol. The proposed protocol is simple, rapid and required small sample size, yielding about 40.5 +/- 1.8 mu g DNA g(-1) sludge. The quality of DNA is good enough for successful PCR amplifications of 16S rDNA, 16S rDNA V3 region and denaturing gradient gel electrophoresis (DGGE) analysis of archaeal population. This described method can also be applied to other environmental samples such as whey and soil.
引用
收藏
页码:111 / 118
页数:8
相关论文
共 50 条
  • [1] Optimization of metagenomic DNA extraction from activated sludge
    Gou, Min
    Qu, Yuan-Yuan
    Zhou, Ji-Ti
    Cao, Xiang-Yu
    Xu, Bing-Wen
    Wang, Teng
    Dalian Ligong Daxue Xuebao/Journal of Dalian University of Technology, 2012, 52 (06): : 803 - 808
  • [2] Optimization of metagenomic DNA extraction from activated sludge samples
    Qu, Yuan-Yuan
    Zhang, Qiang
    Wei, Li
    Ma, Fang
    Zhou, Ji-Ti
    Pi, Wen-Qing
    Gou, Min
    ASIA-PACIFIC JOURNAL OF CHEMICAL ENGINEERING, 2009, 4 (05) : 780 - 786
  • [3] Extraction DNA from Activated Sludge-Comparing with Soil Sample
    谢冰
    奚旦立
    陈季华
    Journal of DongHua University, 2003, (01) : 127 - 130
  • [4] Effect of extraction method on the structure and bioactivity of polysaccharides from activated sludge
    Liu, Jie
    Zhang, Zi
    Deng, Yangfan
    Chen, Guanghao
    WATER RESEARCH, 2024, 253
  • [5] Effect of extraction method on EPS from activated sludge: An HPSEC investigation
    Comte, Sophie
    Guibaud, Gilles
    Baudu, Michel
    JOURNAL OF HAZARDOUS MATERIALS, 2007, 140 (1-2) : 129 - 137
  • [6] A simple method of DNA extraction from Mycobacterium tuberculosis
    Jaber, M
    Rattan, A
    Verma, A
    Tyagi, J
    Kumar, R
    TUBERCLE AND LUNG DISEASE, 1995, 76 (06): : 578 - 581
  • [7] Protein extraction from activated sludge
    Denecke, M.
    WATER SCIENCE AND TECHNOLOGY, 2006, 54 (01) : 175 - 181
  • [8] Polymer extraction from activated sludge
    Novak, J.T.
    Haugan, B.-E.
    Journal of the Water Pollution Control Federation, 1981, 53 (09): : 1420 - 1424
  • [9] Extraction of enzymes from activated sludge
    Nabarlatz, D.
    Vondrysova, J.
    Jenicek, P.
    Stuber, F.
    Font, J.
    Fortuny, A.
    Fabregat, A.
    Bengoa, C.
    WASTE MANAGEMENT AND THE ENVIRONMENT IV, 2008, 109 : 249 - +
  • [10] A simple method to release polyphosphate from activated sludge for phosphorus reuse and recycling
    Kuroda, A
    Takiguchi, N
    Gotanda, T
    Nomura, K
    Kato, J
    Ikeda, T
    Ohtake, H
    BIOTECHNOLOGY AND BIOENGINEERING, 2002, 78 (03) : 333 - 338