A structural perspective of RNA recognition by intrinsically disordered proteins

被引:60
作者
Basu, Sushmita [1 ]
Bahadur, Ranjit Prasad [1 ]
机构
[1] Indian Inst Technol Kharagpur, Dept Biotechnol, Computat Struct Biol Lab, Kharagpur 721302, W Bengal, India
关键词
RNA binding proteins; Protein-RNA recognition; Structural flexibility; Induced folding; Polymorphic conformation; VIRUS CORE PROTEIN; MENTAL-RETARDATION PROTEIN; SMN TUDOR DOMAIN; MOLECULAR RECOGNITION; RIBOSOMAL-PROTEIN; NUCLEOCAPSID PROTEIN; BINDING PROTEINS; MESSENGER-RNAS; LINEAR MOTIFS; PHAGE-LAMBDA;
D O I
10.1007/s00018-016-2283-1
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Protein-RNA recognition is essential for gene expression and its regulation, which is indispensable for the survival of the living organism at one hand, on the other hand, misregulation of this recognition may lead to their extinction. Polymorphic conformation of both the interacting partners is a characteristic feature of such molecular recognition that promotes the assembly. Many RNA binding proteins (RBP) or regions in them are found to be intrinsically disordered, and this property helps them to play a central role in the regulatory processes. Sequence composition and the length of the flexible linkers between RNA binding domains in RBPs are crucial in making significant contacts with its partner RNA. Polymorphic conformations of RBPs can provide thermodynamic advantage to its binding partner while acting as a chaperone. Prolonged extensions of the disordered regions in RBPs also contribute to the stability of the large cellular machines including ribosome and viral assemblies. The involvement of these disordered regions in most of the significant cellular processes makes RBPs highly associated with various human diseases that arise due to their misregulation.
引用
收藏
页码:4075 / 4084
页数:10
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