Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma

被引:46
作者
Eun, Young-Gyu [1 ]
Lee, Jung-Woo [2 ]
Kim, Seung Woo [3 ]
Hyun, Dong-Wook [4 ,5 ]
Bae, Jin-Woo [4 ,5 ]
Lee, Young Chan [1 ]
机构
[1] Kyung Hee Univ, Sch Med, Dept Otolaryngol Head & Neck Surg, 892 Dongnamro, Seoul 05278, South Korea
[2] Kyung Hee Univ, Sch Dent, Dept Oral & Maxillofacial Surg, Seoul, South Korea
[3] Vet Hlth Serv Med Ctr, Dept Otolaryngol Head & Neck Surg, Seoul, South Korea
[4] Kyung Hee Univ, Dept Biol, Seoul, South Korea
[5] Kyung Hee Univ, Dept Biomed & Pharmaceut Sci, Seoul, South Korea
基金
新加坡国家研究基金会;
关键词
NECK-CANCER; HEAD; MICROORGANISMS; MULTIVARIATE; DISSECTION; CAVITY;
D O I
10.1038/s41598-021-02638-9
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Oral microbiota can alter cancer susceptibility and progression by modulating metabolism and inflammation. We assessed the association between the oral microbiome and lymph node (LN) metastasis in oral squamous cell carcinoma (OSCC). We collected a total of 54 saliva samples from patients with OSCC before surgery. LN metastasis was assessed based on postoperative pathological examination. We used QIIME2, linear discriminant analysis effect size (LEfSe), and PICRUSt2 methods to analyze microbial dysbiosis. A random forest classifier was used to assess whether the oral microbiome could predict LN metastasis. Among the 54 OSCC samples, 20 had LN metastasis, and 34 had no evidence of metastasis. There was a significant difference in beta-diversity between the metastasis and no metastasis groups. Through LEfSe analysis, the metastasis group was enriched in the genera Prevotella, Stomatobaculum, Bifidobacterium, Peptostreptococcaceae, Shuttleworthia and Finegoldia. Pathways related to signal peptidase II were predominant in the no metastasis group. The RF model showed a modestly high accuracy for predicting metastasis. Differences in microbial community composition and functions were observed in the oral microbiome of patients with OSCC with and without LN metastasis. However, the finding that specific taxa may be associated with LN metastasis should be verified in a further prospective study.
引用
收藏
页数:10
相关论文
共 42 条
[1]   Microbiome 101: Studying, Analyzing, and Interpreting Gut Microbiome Data for Clinicians [J].
Allaband, Celeste ;
McDonald, Daniel ;
Vazquez-Baeza, Yoshiki ;
Minich, Jeremiah J. ;
Tripathi, Anupriya ;
Brenner, David A. ;
Loomba, Rohit ;
Smarr, Larry ;
Sandborn, William J. ;
Schnabl, Bernd ;
Dorrestein, Pieter ;
Zarrinpar, Amir ;
Knight, Rob .
CLINICAL GASTROENTEROLOGY AND HEPATOLOGY, 2019, 17 (02) :218-230
[2]   The E-cadherin-catenin complex in tumour metastasis: structure, function and regulation [J].
Beavon, IRG .
EUROPEAN JOURNAL OF CANCER, 2000, 36 (13) :1607-1620
[3]   Evaluation of the type I signal peptidase as antibacterial target for biofilm-associated infections of Staphylococcus epidermidis [J].
Bockstael, Katrijn ;
Geukens, Nick ;
Van Mellaert, Lieve ;
Herdewijn, Piet ;
Anne, Jozef ;
Van Aerschot, Arthur .
MICROBIOLOGY-SGM, 2009, 155 :3719-3729
[4]   Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2 [J].
Bolyen, Evan ;
Rideout, Jai Ram ;
Dillon, Matthew R. ;
Bokulich, NicholasA. ;
Abnet, Christian C. ;
Al-Ghalith, Gabriel A. ;
Alexander, Harriet ;
Alm, Eric J. ;
Arumugam, Manimozhiyan ;
Asnicar, Francesco ;
Bai, Yang ;
Bisanz, Jordan E. ;
Bittinger, Kyle ;
Brejnrod, Asker ;
Brislawn, Colin J. ;
Brown, C. Titus ;
Callahan, Benjamin J. ;
Caraballo-Rodriguez, Andres Mauricio ;
Chase, John ;
Cope, Emily K. ;
Da Silva, Ricardo ;
Diener, Christian ;
Dorrestein, Pieter C. ;
Douglas, Gavin M. ;
Durall, Daniel M. ;
Duvallet, Claire ;
Edwardson, Christian F. ;
Ernst, Madeleine ;
Estaki, Mehrbod ;
Fouquier, Jennifer ;
Gauglitz, Julia M. ;
Gibbons, Sean M. ;
Gibson, Deanna L. ;
Gonzalez, Antonio ;
Gorlick, Kestrel ;
Guo, Jiarong ;
Hillmann, Benjamin ;
Holmes, Susan ;
Holste, Hannes ;
Huttenhower, Curtis ;
Huttley, Gavin A. ;
Janssen, Stefan ;
Jarmusch, Alan K. ;
Jiang, Lingjing ;
Kaehler, Benjamin D. ;
Bin Kang, Kyo ;
Keefe, Christopher R. ;
Keim, Paul ;
Kelley, Scott T. ;
Knights, Dan .
NATURE BIOTECHNOLOGY, 2019, 37 (08) :852-857
[5]   Detection of Fusobacterium in oral and head and neck cancer samples: A systematic review and meta-analysis [J].
Bronzato, Juliana D. ;
Bomfim, Rafael A. ;
Edwards, David H. ;
Crouch, Dorothy ;
Hector, Mark P. ;
Gomes, Brenda P. F. A. .
ARCHIVES OF ORAL BIOLOGY, 2020, 112
[6]  
CEREZO L, 1992, CANCER, V69, P1224
[7]   Invasive Fusobacterium nucleatum activates beta-catenin signaling in colorectal cancer via a TLR4/P-PAK1 cascade [J].
Chen, Yongyu ;
Peng, Yan ;
Yu, Jiahui ;
Chen, Ting ;
Wu, Yaxin ;
Shi, Lei ;
Li, Qing ;
Wu, Jiao ;
Fu, Xiangsheng .
ONCOTARGET, 2017, 8 (19) :31705-31717
[8]   Elective versus Therapeutic Neck Dissection in Node-Negative Oral Cancer [J].
D'Cruz, Anil K. ;
Vaish, Richa ;
Kapre, Neeti ;
Dandekar, Mitali ;
Gupta, Sudeep ;
Hawaldar, Rohini ;
Agarwal, Jai Prakash ;
Pantvaidya, Gouri ;
Chaukar, Devendra ;
Deshmukh, Anuja ;
Kane, Shubhada ;
Arya, Supreeta ;
Ghosh-Laskar, Sarbani ;
Chaturvedi, Pankaj ;
Pai, Prathamesh ;
Nair, Sudhir ;
Nair, Deepa ;
Badwe, Rajendra .
NEW ENGLAND JOURNAL OF MEDICINE, 2015, 373 (06) :521-529
[9]  
Douglas GM, 2019, bioRxiv, DOI DOI 10.1101/672295
[10]   Methods of sputum processing for cell counts, immunocytochemistry and in situ hybridisation [J].
Efthimiadis, A ;
Spanevello, A ;
Hamid, Q ;
Kelly, MM ;
Linden, M ;
Louis, R ;
Pizzichini, MMM ;
Pizzichini, E ;
Ronchi, C ;
Van Overveld, F ;
Djukanovic, R .
EUROPEAN RESPIRATORY JOURNAL, 2002, 20 :19S-23S