The potential HLA Class I-restricted epitopes derived from LeIF and TSA of Leishmania donovani evoke anti-leishmania CD8+T lymphocyte response

被引:20
作者
Dikhit, Manas Ranjan [1 ,2 ]
Das, Sushmita [3 ]
Mahantesh, Vijaya [2 ]
Kumar, Akhilesh [2 ]
Singh, Ashish Kumar [2 ]
Dehury, Budheswar [4 ]
Rout, Ajaya Kumar [5 ]
Ali, Vahab [6 ]
Sahoo, Ganesh Chandra [1 ]
Topno, Roshan Kamal [7 ]
Pandey, Krishna [8 ]
Das, V. N. R. [8 ]
Bimal, Sanjiva [2 ]
Das, Pradeep [9 ]
机构
[1] Rajendra Mem Res Inst Med Sci, BioMed Informat Div, Patna 800007, Bihar, India
[2] Rajendra Mem Res Inst Med Sci, Dept Immunol, Patna 800007, Bihar, India
[3] All India Inst Med Sci, Dept Microbiol, Patna 801507, Bihar, India
[4] ICMR Reg Med Res Ctr, BioMed Informat Ctr, Bhubaneswar 751023, Odisha, India
[5] ICAR Cent Inland Fisheries Res Inst, Biotechnol Lab, Kolkata 700120, W Bengal, India
[6] Rajendra Mem Res Inst Med Sci, Dept Clin Biochem, Patna 800007, Bihar, India
[7] Rajendra Mem Res Inst Med Sci, Dept Epidemiol, Patna 800007, Bihar, India
[8] Rajendra Mem Res Inst Med Sci, Dept Clin Med, Patna 800007, Bihar, India
[9] Rajendra Mem Res Inst Med Sci, Dept Mol Parasitol, Patna 800007, Bihar, India
关键词
T-CELL EPITOPE; PROTEIN DISULFIDE-ISOMERASE; ANTIGENIC CTL EPITOPES; VISCERAL LEISHMANIASIS; IMMUNE-RESPONSE; GAMMA-INTERFERON; VACCINE; PREDICTION; IMMUNOGENICITY; PEPTIDES;
D O I
10.1038/s41598-018-32040-x
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
To explore new protective measure against visceral leishmaniasis, reverse vaccinology approach was employed to identify key immunogenic regions which can mediate long-term immunity. In-depth computational analysis revealed nine promiscuous epitopes which can possibly be presented by 46 human leukocyte antigen, thereby broadening the worldwide population up to 94.16%. This is of reasonable significance that most of the epitopes shared 100% sequence homology with other Leishmania species and could evoke a common pattern of protective immune response. Transporter associated with antigen processing binding affinity, molecular docking approach followed by dynamics simulation and human leukocyte antigen stabilization assay suggested that the best five optimal set of epitopes bind in between alpha 1 and alpha 2 binding groove with sufficient affinity and stability which allows the translocation of intact epitope to the cell surface. Fascinatingly, the human leukocyte antigen stabilization assay exhibited a modest correlation with the positive immunogenicity score predicted by class I pMHC immunogenicity predictor. A support for this notion came from ELISA and FACS analysis where the epitopes as a cocktail induced CD8+ IFN-gamma and Granzyme B levels significantly in treated visceral leishmaniasis subject which suggests the immunogenic ability of the selected epitopes.
引用
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页数:13
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