Correlation of life-history traits with the molecular diversity of bird nuclear coding elements

被引:0
作者
Zhang, Tangjie [1 ]
Liu, Yuzhi [2 ]
Wang, Zhiyue [3 ]
机构
[1] Yangzhou Univ, Coll Vet Med, Yangzhou 225009, Peoples R China
[2] Agr Univ Hebei, Coll Anim Sci & Technol, Baoding, Peoples R China
[3] Yangzhou Univ, Coll Anim Sci & Technol, Yangzhou 225009, Peoples R China
关键词
Ayes; life-history traits; mutation; nearly neutral theory; SLIGHTLY DELETERIOUS MUTATIONS; NEUTRAL THEORY; HUMAN GENOME; BODY-SIZE; EVOLUTION; MAMMALS; GENES; SUBSTITUTIONS; POLYMORPHISM; SELECTION;
D O I
暂无
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Question: Is there a relationship between mutations in nuclear coding genes sites and life-history traits? Analyses of polymorphism data of Ayes nuclear genes suggest that this is the case. Data: Obtained from Polymorphix and Popset of GenBank: 752 groups of polymorphism data from 104 Ayes nuclear genes of 15 families, 53 genera, 297 species. Search method: We used Watterson's estimator (theta(w)), calculated separately from the non-synonymous (theta(a))and synonymous (theta(s))sites of the various gene fragments. We performed correlation analysis of the proportion of average non-synonymous mutation sites in coding genes sites and four life-history traits (body mass, metabolic rate, generation time, and longevity). Conclusions: The proportion of non-synonymous sites is significantly negatively correlated with body mass. But the proportion of non-synonymous sites is not significantly correlated with generation time. A larger fraction of slightly deleterious mutations is fixed in species with either a bigger body mass or a low effective population size (Ne).
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页码:987 / 994
页数:8
相关论文
共 28 条
  • [1] [Anonymous], 1994, EVOLUTION AGE STRUCT
  • [2] Polymorphlix: a sequence polymorphism database
    Bazin, E
    Duret, L
    Penel, S
    Galtier, N
    [J]. NUCLEIC ACIDS RESEARCH, 2005, 33 : D481 - D484
  • [3] The relationship between animal abundance and body size: A review of the mechanisms
    Blackburn, TM
    Gaston, KJ
    [J]. ADVANCES IN ECOLOGICAL RESEARCH, VOL 28, 1999, 28 : 181 - 210
  • [4] One equation fits overkill: why allometry underpins both prehistoric and modern body size-biased extinctions
    Brook, BW
    Bowman, DMJS
    [J]. POPULATION ECOLOGY, 2005, 47 (02) : 137 - 141
  • [5] Natural selection on protein-coding genes in the human genome
    Bustamante, CD
    Fledel-Alon, A
    Williamson, S
    Nielsen, R
    Hubisz, MT
    Glanowski, S
    Tanenbaum, DM
    White, TJ
    Sninsky, JJ
    Hernandez, RD
    Civello, D
    Adams, MD
    Cargill, M
    Clark, AG
    [J]. NATURE, 2005, 437 (7062) : 1153 - 1157
  • [6] Multiple causes of high extinction risk in large mammal species
    Cardillo, M
    Mace, GM
    Jones, KE
    Bielby, J
    Bininda-Emonds, ORP
    Sechrest, W
    Orme, CDL
    Purvis, A
    [J]. SCIENCE, 2005, 309 (5738) : 1239 - 1241
  • [7] HAGR: the human ageing genomic resources
    de Magalhaes, JP
    Costa, J
    Toussaint, O
    [J]. NUCLEIC ACIDS RESEARCH, 2005, 33 : D537 - D543
  • [8] Quantifying the slightly deleterious mutation model of molecular evolution
    Eyre-Walker, A
    Keightley, PD
    Smith, NGC
    Gaffney, D
    [J]. MOLECULAR BIOLOGY AND EVOLUTION, 2002, 19 (12) : 2142 - 2149
  • [9] Gillespie J. H., 1991, CAUSES MOL EVOLUTION
  • [10] Birds as long-lived animal models for the study of aging
    Holmes, DJ
    Ottinger, MA
    [J]. EXPERIMENTAL GERONTOLOGY, 2003, 38 (11-12) : 1365 - 1375