The COVID-19 Pandemic: A Comprehensive Review of Taxonomy, Genetics, Epidemiology, Diagnosis, Treatment, and Control

被引:419
作者
Helmy, Yosra A. [1 ,2 ]
Fawzy, Mohamed [3 ]
Elaswad, Ahmed [4 ]
Sobieh, Ahmed [5 ]
Kenney, Scott P. [1 ]
Shehata, Awad A. [6 ,7 ]
机构
[1] Ohio State Univ, Ohio Agr Res & Dev Ctr, Dept Vet Prevent Med, Wooster, OH 44691 USA
[2] Suez Canal Univ, Fac Vet Med, Dept Anim Hyg Zoonoses & Anim Ethol, Ismailia 41522, Egypt
[3] Suez Canal Univ, Fac Vet Med, Dept Virol, Ismailia 41522, Egypt
[4] Suez Canal Univ, Fac Vet Med, Dept Anim Wealth Dev, Ismailia 41522, Egypt
[5] Univ Massachusetts, Sch Med, Dept Radiol, Worcester, MA 01655 USA
[6] Sadat City Univ, Fac Vet Med, Avian & Rabbit Dis Dept, Sadat 32897, Egypt
[7] PerNaturam GmbH, Res & Dev Sect, D-56290 Godenroth, Germany
关键词
SARS-CoV-2; COVID-19; One Health; genetics; epidemiology; control; outbreak; pneumonia; treatment; diagnosis; public health; RESPIRATORY SYNDROME CORONAVIRUS; FAVIPIRAVIR T-705; INFLUENZA-VIRUS; PNEUMONIA; EVOLUTION; SARS; 2019-NCOV; CULTIVATION; RIBAVIRIN; PROTEIN;
D O I
10.3390/jcm9041225
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
A pneumonia outbreak with unknown etiology was reported in Wuhan, Hubei province, China, in December 2019, associated with the Huanan Seafood Wholesale Market. The causative agent of the outbreak was identified by the WHO as the severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2), producing the disease named coronavirus disease-2019 (COVID-19). The virus is closely related (96.3%) to bat coronavirus RaTG13, based on phylogenetic analysis. Human-to-human transmission has been confirmed even from asymptomatic carriers. The virus has spread to at least 200 countries, and more than 1,700,000 confirmed cases and 111,600 deaths have been recorded, with massive global increases in the number of cases daily. Therefore, the WHO has declared COVID-19 a pandemic. The disease is characterized by fever, dry cough, and chest pain with pneumonia in severe cases. In the beginning, the world public health authorities tried to eradicate the disease in China through quarantine but are now transitioning to prevention strategies worldwide to delay its spread. To date, there are no available vaccines or specific therapeutic drugs to treat the virus. There are many knowledge gaps about the newly emerged SARS-CoV-2, leading to misinformation. Therefore, in this review, we provide recent information about the COVID-19 pandemic. This review also provides insights for the control of pathogenic infections in humans such as SARS-CoV-2 infection and future spillovers.
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页数:29
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共 127 条
[21]  
Chung MS, 2020, EUR RADIOL, V30, P2182, DOI [10.1007/s00330-019-06574-1, 10.1148/radiol.2020200230]
[22]   Detection of 2019 novel coronavirus (2019-nCoV) by real-time RT-PCR (Publication with Expression of Concern) [J].
Corman, Victor M. ;
Landt, Olfert ;
Kaiser, Marco ;
Molenkamp, Richard ;
Meijer, Adam ;
Chu, Daniel K. W. ;
Bleicker, Tobias ;
Bruenink, Sebastian ;
Schneider, Julia ;
Schmidt, Marie Luisa ;
Mulders, Daphne G. J. C. ;
Haagmans, Bart L. ;
van der Veer, Bas ;
van den Brink, Sharon ;
Wijsman, Lisa ;
Goderski, Gabriel ;
Romette, Jean-Louis ;
Ellis, Joanna ;
Zambon, Maria ;
Peiris, Malik ;
Goossens, Herman ;
Reusken, Chantal ;
Koopmans, Marion P. G. ;
Drosten, Christian .
EUROSURVEILLANCE, 2020, 25 (03) :23-30
[23]   Epidemiological research priorities for public health control of the ongoing global novel coronavirus (2019-nCoV) outbreak [J].
Cowling, Benjamin J. ;
Leung, Gabriel M. .
EUROSURVEILLANCE, 2020, 25 (06) :2-6
[24]   Origin and evolution of pathogenic coronaviruses [J].
Cui, Jie ;
Li, Fang ;
Shi, Zheng-Li .
NATURE REVIEWS MICROBIOLOGY, 2019, 17 (03) :181-192
[25]   Rescue fecal microbiota transplantation for antibiotic-associated diarrhea in critically ill patients [J].
Dai, Min ;
Liu, Yafei ;
Chen, Wei ;
Buch, Heena ;
Shan, Yi ;
Chang, Liuhui ;
Bai, Yong ;
Shen, Chen ;
Zhang, Xiaoyin ;
Huo, Yufeng ;
Huang, Dian ;
Yang, Zhou ;
Hu, Zhihang ;
He, Xuwei ;
Pan, Junyu ;
Hu, Lili ;
Pan, Xinfang ;
Wu, Xiangtao ;
Deng, Bin ;
Li, Zhifeng ;
Cui, Bota ;
Zhang, Faming .
CRITICAL CARE, 2019, 23 (01)
[26]   A strategy to prevent future epidemics similar to the 2019-nCoV outbreak [J].
Daszak, Peter ;
Olival, Kevin J. ;
Li, Hongying .
BIOSAFETY AND HEALTH, 2020, 2 (01) :6-8
[27]   Recombinant Canine Coronaviruses in Dogs, Europe [J].
Decaro, Nicola ;
Mari, Viviana ;
Elia, Gabriella ;
Addie, Diane D. ;
Camero, Michele ;
Lucente, Maria Stella ;
Martella, Vito ;
Buonavoglia, Canio .
EMERGING INFECTIOUS DISEASES, 2010, 16 (01) :41-47
[28]   Long-Term Safety and Efficacy of Fecal Microbiota Transplant in Active Ulcerative Colitis [J].
Ding, Xiao ;
Li, Qianqian ;
Li, Pan ;
Zhang, Ting ;
Cui, Bota ;
Ji, Guozhong ;
Lu, Xiang ;
Zhang, Faming .
DRUG SAFETY, 2019, 42 (07) :869-880
[29]   Microbiota and Its Role on Viral Evasion: Is It With Us or Against Us? [J].
Dominguez-Diaz, Carolina ;
Garcia-Orozco, Alejandra ;
Riera-Leal, Annie ;
Ricardo Padilla-Arellano, Jorge ;
Fafutis-Morris, Mary .
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY, 2019, 9
[30]   Identification of a novel coronavirus in patients with severe acute respiratory syndrome [J].
Drosten, C ;
Günther, S ;
Preiser, W ;
van der Werf, S ;
Brodt, HR ;
Becker, S ;
Rabenau, H ;
Panning, M ;
Kolesnikova, L ;
Fouchier, RAM ;
Berger, A ;
Burguière, AM ;
Cinatl, J ;
Eickmann, M ;
Escriou, N ;
Grywna, K ;
Kramme, S ;
Manuguerra, JC ;
Müller, S ;
Rickerts, V ;
Stürmer, M ;
Vieth, S ;
Klenk, HD ;
Osterhaus, ADME ;
Schmitz, H ;
Doerr, HW .
NEW ENGLAND JOURNAL OF MEDICINE, 2003, 348 (20) :1967-1976