Enhancement of Activity and Thermostability of Keratinase From Pseudomonas aeruginosa CCTCC AB2013184 by Directed Evolution With Noncanonical Amino Acids

被引:13
作者
Pan, Xianchao [1 ]
Yang, Jian [1 ]
Xie, Peijuan [1 ]
Zhang, Jing [1 ]
Ke, Famin [1 ]
Guo, Xiurong [1 ]
Liang, Manyu [1 ]
Liu, Li [1 ]
Wang, Qin [1 ]
Gao, Xiaowei [1 ,2 ,3 ]
机构
[1] Southwest Med Univ, Sch Pharm, Luzhou, Peoples R China
[2] Southwest Med Univ, Dept Pharm, Affiliated Hosp, Luzhou, Peoples R China
[3] Zhejiang Univ, Dept Chem, Hangzhou, Peoples R China
基金
中国博士后科学基金;
关键词
metallopeptidase; keratinase; genetic code expansion; noncanonical amino acid; protein engineering; directed evolution; Pseudomonas aeruginosa; thermostability; MOLECULAR-DYNAMICS; GENETIC-CODE; SIMULATION; EXPRESSION; PURIFICATION; DESIGN; CELLS; EWALD;
D O I
10.3389/fbioe.2021.770907
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A keratinase from Pseudomonas aeruginosa (KerPA), which belongs to the M4 family of metallopeptidases, was characterised in this study. This enzyme was engineered with non-canonical amino acids (ncAAs) using genetic code expansion. Several variants with enhanced activity and thermostability were identified and the most prominent, Y21pBpF/Y70pBpF/Y114pBpF, showed an increase in enzyme activity and half-life of approximately 1.3-fold and 8.2-fold, respectively. Considering that keratinases usually require reducing agents to efficiently degrade keratin, the Y21pBpF/Y70pBpF/Y114pBpF variant with enhanced activity and stability under reducing conditions may have great significance for practical applications. Molecular Dynamics (MD) was performed to identify the potential mechanisms underlying these improvements. The results showed that mutation with pBpF at specific sites of the enzyme could fill voids, form new interactions, and reshape the local structure of the active site of the enzyme.</p>
引用
收藏
页数:15
相关论文
共 44 条
  • [41] Exploring the potential impact of an expanded genetic code on protein function
    Xiao, Han
    Nasertorabi, Fariborz
    Choi, Sei-hyun
    Han, Gye Won
    Reed, Sean A.
    Stevens, Raymond C.
    Schultz, Peter G.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (22) : 6961 - 6966
  • [42] Enhancement of keratin-degradation ability of the keratinase KerBL from Bacillus licheniformis WHU by proximity-triggered chemical crosslinking
    Yi, Dong
    Xing, Juan
    Gao, Yanping
    Pan, Xianchao
    Xie, Peijuan
    Yang, Jian
    Wang, Qin
    Gao, Xiaowei
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2020, 163 : 1458 - 1470
  • [43] Comparative Analyses of the Transcriptome and Proteome of Escherichia coli C321.oA and Further Improving Its Noncanonical Amino Acids Containing Protein Expression Ability by Integration of T7 RNA Polymerase
    Yi, Huawei
    Zhang, Jing
    Ke, Famin
    Guo, Xiurong
    Yang, Jian
    Xie, Peijuan
    Liu, Li
    Wang, Qin
    Gao, Xiaowei
    [J]. FRONTIERS IN MICROBIOLOGY, 2021, 12
  • [44] Biosynthesis and genetic encoding of phosphothreonine through parallel setection and deep sequencing
    Zhang, Michael Shaofei
    Brunner, Simon F.
    Huguenin-Dezot, Nicolas
    Liang, Alexandria Deliz
    Schmied, Wolfgang H.
    Rogerson, Daniel T.
    Chin, Jason W.
    [J]. NATURE METHODS, 2017, 14 (07) : 729 - +