Avianbase: a community resource for bird genomics

被引：25

作者：

Eoery, Lel ^{[1
]}

Gilbert, M. Thomas P. ^{[2
,3
]}

Li, Cai ^{[2
,4
]}

Li, Bo ^{[2
,4
,5
]}

Archibald, Alan ^{[1
]}

Aken, Bronwen L. ^{[6
,7
]}

Zhang, Guojie ^{[4
,8
]}

Jarvis, Erich ^{[9
,10
]}

Flicek, Paul ^{[6
,7
]}

Burt, David W. ^{[1
]}

机构：

[1] Univ Edinburgh, Sch Vet Studies, Roslin Inst & Royal Dick, Dept Genom & Genet, Roslin EH25 9RG, Midlothian, Scotland

[2] Univ Copenhagen, Nat Hist Museum Denmark, Ctr GeoGenet, DK-1350 Copenhagen, Denmark

[3] Curtin Univ, Trace & Environm DNA Lab, Dept Environm & Agr, Perth, WA 6102, Australia

[4] BGI Shenzhen, China Natl GeneBank, Shenzhen 518083, Peoples R China

[5] Xi An Jiao Tong Univ, Coll Med & Forens, Xian 710061, Peoples R China

[6] European Bioinformat Inst, European Mol Biol Lab, Cambridge CB10 1SD, England

[7] Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England

[8] Univ Copenhagen, Dept Biol, Ctr Social Evolut, DK-2100 Copenhagen, Denmark

[9] Howard Hughes Med Inst, Dept Neurobiol, Durham, NC 27710 USA

[10] Duke Univ, Med Ctr, Durham, NC 27710 USA

来源：

GENOME BIOLOGY | 2015年 / 16卷

基金：

英国惠康基金; 英国生物技术与生命科学研究理事会;

关键词：

Zebra Finch; Tandem Repeat Finder; Software Infrastructure; Repeat Identification; Computer Infrastructure;

D O I：

10.1186/s13059-015-0588-2

中图分类号：

Q81 [生物工程学（生物技术）]; Q93 [微生物学];

学科分类号：

071005 ; 0836 ; 090102 ; 100705 ;

摘要：

Giving access to sequence and annotation data for genome assemblies is important because, while facilitating research, it places both assembly and annotation quality under scrutiny, resulting in improvements to both. Therefore we announce Avianbase, a resource for bird genomics, which provides access to data released by the Avian Phylogenomics Consortium.

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