Assignment strategies for aliphatic protons in the solid-state in randomly protonated proteins

被引:18
作者
Asami, Sam [1 ]
Reif, Bernd [1 ,2 ,3 ]
机构
[1] Leibniz Inst Mol Pharmakol FMP, D-13125 Berlin, Germany
[2] Tech Univ Munich, Munich Ctr Integrated Prot Sci, Dept Chem CIPS M, D-85747 Garching, Germany
[3] Deutsch Forschungszentrum Gesundheit & Umwelt HMG, Helmholtz Zentrum Munchen HMGU, D-85764 Neuherberg, Germany
关键词
Magic angle spinning (MAS) solid-state NMR; Perdeuteration; 2H-labeling; Side chain assignment strategies; ANGLE-SPINNING NMR; HIGH-RESOLUTION; PERDEUTERATED PROTEINS; CROSS-POLARIZATION; ESCHERICHIA-COLI; MULTIDIMENSIONAL NMR; SOLVENT SUPPRESSION; COUPLING-CONSTANTS; PULSE SEQUENCES; SH3; DOMAIN;
D O I
10.1007/s10858-011-9591-4
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Biological solid-state nuclear magnetic resonance spectroscopy developed rapidly in the past two decades and emerged as an important tool for structural biology. Resonance assignment is an essential prerequisite for structure determination and the characterization of motional properties of a molecule. Experiments, which rely on carbon or nitrogen detection, suffer, however, from low sensitivity. Recently, we introduced the RAP (Reduced Adjoining Protonation) labeling scheme, which allows to detect backbone and sidechain protons with high sensitivity and resolution. We present here a H-1-detected 3D (H)CCH experiment for assignment of backbone and sidechain proton resonances. Resolution is significantly improved by employing simultaneous (CO)-C-13 and C-13 beta J-decoupling during evolution of the C-13 alpha chemical shift. In total, similar to 90% of the H-1 alpha-C-13 alpha backbone resonances of chicken alpha-spectrin SH3 could be assigned.
引用
收藏
页码:31 / 39
页数:9
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