Call for consensus in Chlamydia trachomatis nomenclature: moving from biovars, serovars, and serotypes to genovariants and genotypes Comment

被引:9
作者
de Vries, Henry J. C. [1 ,2 ]
Pannekoek, Yvonne [2 ,3 ]
Dean, Debora [4 ]
Bavoil, Patrick M. [5 ]
Borel, Nicole [6 ]
Greub, Gilbert [7 ,8 ,9 ]
Morre, Servaas A. [10 ,11 ]
机构
[1] Publ Hlth Serv, Ctr Sexual Hlth, Dept Infect Dis, Amsterdam, Netherlands
[2] Univ Amsterdam, Amsterdam Inst Infect & Immun, Acad Med Ctr, Dept Dermatol,Amsterdam UMC, Amsterdam, Netherlands
[3] Univ Amsterdam, Amsterdam Inst Infect & Immun, Acad Med Ctr, Dept Med Microbiol,Amsterdam UMC, Amsterdam, Netherlands
[4] Univ Calif San Francisco, Benioff Childrens Hosp, Oakland Res Inst, Ctr Immunobiol & Vaccine Dev, Oakland, CA USA
[5] Univ Maryland, Sch Dent, Dept Microbial Pathogenesis, Baltimore, MD 21201 USA
[6] Univ Zurich, Vetsuisse Fac, Inst Vet Pathol, Dept Pathobiol, Zurich, Switzerland
[7] Univ Lausanne, Inst Microbiol, Lausanne, Switzerland
[8] Univ Hosp Ctr, Lausanne, Switzerland
[9] ICSP Subcomm Taxon Chlamydiae, Lausanne, Switzerland
[10] Univ Maastricht, Res Sch GROW Sch Oncol & Dev Biol, Inst Publ Hlth Genom, Dept Genet & Cell Biol,Fac Hlth Med & Life Sci, Maastricht, Netherlands
[11] Vrije Univ Amsterdam, Med Ctr, Dept Med Microbiol & Infect Control, Dutch Chlamydia Trachomatis Reference Lab, Amsterdam, Netherlands
关键词
Chlamydiae; Diagnostic microbiology; Genotype; Serotype; Taxonomy; LYMPHOGRANULOMA-VENEREUM; NUCLEOTIDE; STRAINS;
D O I
10.1016/j.cmi.2022.02.013
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
引用
收藏
页码:761 / 763
页数:3
相关论文
共 19 条
[1]   High-resolution typing of Chlamydia trachomatis: epidemiological and clinical uses [J].
de Vries, Henry J. C. ;
van der Loeff, Maarten F. Schim ;
Bruisten, Sylvia M. .
CURRENT OPINION IN INFECTIOUS DISEASES, 2015, 28 (01) :61-71
[2]  
Greub Gilbert, 2018, Int J Syst Evol Microbiol, V68, P3683, DOI 10.1099/ijsem.0.003049
[3]  
Haber R, 2017, SEX TRANSM DIS, V44, P310, DOI [10.1097/OLQ.0000000000000597, 10.1097/olq.0000000000000597]
[4]   Whole-genome analysis of diverse Chlamydia trachomatis strains identifies phylogenetic relationships masked by current clinical typing [J].
Harris, Simon R. ;
Clarke, Ian N. ;
Seth-Smith, Helena M. B. ;
Solomon, Anthony W. ;
Cutcliffe, Lesley T. ;
Marsh, Peter ;
Skilton, Rachel J. ;
Holland, Martin J. ;
Mabey, David ;
Peeling, Rosanna W. ;
Lewis, David A. ;
Spratt, Brian G. ;
Unemo, Magnus ;
Persson, Kenneth ;
Bjartling, Carina ;
Brunham, Robert ;
de Vries, Henry J. C. ;
Morre, Servaas A. ;
Speksnijder, Arjen ;
Bebear, Cecile M. ;
Clerc, Maite ;
de Barbeyrac, Bertille ;
Parkhill, Julian ;
Thomson, Nicholas R. .
NATURE GENETICS, 2012, 44 (04) :413-U221
[5]   Global Multilocus Sequence Type Analysis of Chlamydia trachomatis Strains from 16 Countries [J].
Herrmann, Bjorn ;
Isaksson, Jenny ;
Ryberg, Martin ;
Tangrot, Jeanette ;
Saleh, Isam ;
Versteeg, Bart ;
Gravningen, Kirsten ;
Bruisten, Sylvia .
JOURNAL OF CLINICAL MICROBIOLOGY, 2015, 53 (07) :2172-2179
[6]   Genovar: a detection and visualization tool for genomic variants [J].
Jung, Kwang Su ;
Moon, Sanghoon ;
Kim, Young Jin ;
Kim, Bong-Jo ;
Park, Kiejung .
BMC BIOINFORMATICS, 2012, 13
[7]   Distribution of Chlamydia trachomatis ompA genovars and the new variant of C. trachomatis in the Goteborg area, Sweden [J].
Lagergard, T. ;
Hadad, R. ;
Tunback, P. ;
Lindholm, L. ;
Lowhagen, G. -B. ;
Unemo, M. .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2010, 29 (05) :609-611
[8]   Confirmed inguinal lymphogranuloma venereum genovar L2c in a man who had sex with men, Slovenia, 2015 [J].
Maticic, M. ;
Klavs, I. ;
Zorman, J. Videcnik ;
Vovko, D. Vidmar ;
Kogoj, R. ;
Kese, D. .
EUROSURVEILLANCE, 2016, 21 (05) :2-5
[9]  
Morré SA, 1998, J CLIN MICROBIOL, V36, P345
[10]   Chlamydia trachomatis Biovar L2 Infection in Women in South Africa [J].
Peters, Remco P. H. ;
Doyle, Ronan ;
Redelinghuys, Mathys J. ;
McIntyre, James A. ;
Verjans, Georges M. ;
Breuer, Judith ;
Kock, Marleen M. .
EMERGING INFECTIOUS DISEASES, 2017, 23 (11) :1913-1915