Description of Pseudomonas gregormendelii sp nov., a Novel Psychrotrophic Bacterium from James Ross Island, Antarctica

被引:14
作者
Kosina, Marcel [1 ]
Svec, Pavel [1 ]
Cernohlavkova, Jitka [1 ]
Bartak, Milos [1 ]
Snopkova, Katerina [2 ]
De Vos, Paul [3 ]
Sedlacek, Ivo [1 ]
机构
[1] Masaryk Univ, Fac Sci, Dept Expt Biol, Czech Collect Microorganisms, Kamenice 5, Brno, Czech Republic
[2] Masaryk Univ, Fac Med, Dept Biol, Kamenice 5, Brno, Czech Republic
[3] UGent, Microbiol Lab, Ghent, Belgium
关键词
IDENTIFICATION; DNA; HYBRIDIZATION;
D O I
10.1007/s00284-016-1029-5
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
During the microbiological research performed within the scope of activities of Czech expeditions based at the Johann Gregor Mendel Station at James Ross Island, Antarctica, two psychrotrophic gram-stain negative non-fluorescent strains CCM 8506T and CCM 8507 from soil were extensively characterized using genotypic and phenotypic methods. Initial characterization using ribotyping with HindIII restriction endonuclease and phenotyping implies that both isolates belong to a single Pseudomonas species. Sequencing of rrs, rpoB, rpoD and glnA genes of strain CCM 8506(T) confirmed affiliation of investigated strains within the genus Pseudomonas. Further investigation using automated ribotyping with EcoRI (RiboPrinter(A (R)) Microbial Characterisation System), whole-cell protein profiling using the Agilent 2100 Bioanalyzer system, extensive biochemical testing and DNA-DNA hybridization experiments confirmed that both investigated strains are members of a single taxon which is clearly separated from all hitherto described Pseudomonas spp. Based on all findings, we describe a novel species Pseudomonas gregormendelii sp. nov. with the type strain CCM 8506(T) (=LMG 28632T).
引用
收藏
页码:84 / 90
页数:7
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