2-step deep learning model for landmarks localization in spine radiographs

被引:30
作者
Cina, Andrea [1 ]
Bassani, Tito [1 ]
Panico, Matteo [1 ]
Luca, Andrea [2 ]
Masharawi, Youssef [3 ]
Brayda-Bruno, Marco [2 ]
Galbusera, Fabio [1 ]
机构
[1] IRCCS Ist Ortoped Galeazzi, Via Riccardo Galeazzi 4, I-20161 Milan, Italy
[2] IRCCS Ist Ortoped Galeazzi, Dept Spine Surg 3, Via Riccardo Galeazzi 4, I-20161 Milan, Italy
[3] Tel Aviv Univ, Sackler Fac Med, Stanley Steyer Sch Hlth Profess, Dept Physiotherapy, Tel Aviv, Israel
关键词
RECONSTRUCTION; RELIABILITY; CNN;
D O I
10.1038/s41598-021-89102-w
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
In this work we propose to use Deep Learning to automatically calculate the coordinates of the vertebral corners in sagittal x-rays images of the thoracolumbar spine and, from those landmarks, to calculate relevant radiological parameters such as L1-L5 and L1-S1 lordosis and sacral slope. For this purpose, we used 10,193 images annotated with the landmarks coordinates as the ground truth. We realized a model that consists of 2 steps. In step 1, we trained 2 Convolutional Neural Networks to identify each vertebra in the image and calculate the landmarks coordinates respectively. In step 2, we refined the localization using cropped images of a single vertebra as input to another convolutional neural network and we used geometrical transformations to map the corners to the original image. For the localization tasks, we used a differentiable spatial to numerical transform (DSNT) as the top layer. We evaluated the model both qualitatively and quantitatively on a set of 195 test images. The median localization errors relative to the vertebrae dimensions were 1.98% and 1.68% for x and y coordinates respectively. All the predicted angles were highly correlated with the ground truth, despite non-negligible absolute median errors of 1.84 degrees, 2.43 degrees and 1.98 degrees for L1-L5, L1-S1 and SS respectively. Our model is able to calculate with good accuracy the coordinates of the vertebral corners and has a large potential for improving the reliability and repeatability of measurements in clinical tasks.
引用
收藏
页数:12
相关论文
共 26 条
[1]   Toward Automated 3D Spine Reconstruction from Biplanar Radiographs Using CNN for Statistical Spine Model Fitting [J].
Aubert, B. ;
Vazquez, C. ;
Cresson, T. ;
Parent, S. ;
de Guise, J. A. .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2019, 38 (12) :2796-2806
[2]   MEASUREMENT OF SCOLIOSIS AND KYPHOSIS RADIOGRAPHS - INTRAOBSERVER AND INTEROBSERVER VARIATION [J].
CARMAN, DL ;
BROWNE, RH ;
BIRCH, JG .
JOURNAL OF BONE AND JOINT SURGERY-AMERICAN VOLUME, 1990, 72A (03) :328-333
[3]   Big data analytics for personalized medicine [J].
Cirillo, Davide ;
Valencia, Alfonso .
CURRENT OPINION IN BIOTECHNOLOGY, 2019, 58 :161-167
[4]  
Deng J, 2009, PROC CVPR IEEE, P248, DOI 10.1109/CVPRW.2009.5206848
[5]   Quasi-automatic 3D reconstruction of the full spine from low-dose biplanar X-rays based on statistical inferences and image analysis [J].
Gajny, Laurent ;
Ebrahimi, Shahin ;
Vergari, Claudio ;
Angelini, Elsa ;
Skalli, Wafa .
EUROPEAN SPINE JOURNAL, 2019, 28 (04) :658-664
[6]   Fully automated radiological analysis of spinal disorders and deformities: a deep learning approach [J].
Galbusera, Fabio ;
Niemeyer, Frank ;
Wilke, Hans-Joachim ;
Bassani, Tito ;
Casaroli, Gloria ;
Anania, Carla ;
Costa, Francesco ;
Brayda-Bruno, Marco ;
Sconfienza, Luca Maria .
EUROPEAN SPINE JOURNAL, 2019, 28 (05) :951-960
[7]   Deep Residual Learning for Image Recognition [J].
He, Kaiming ;
Zhang, Xiangyu ;
Ren, Shaoqing ;
Sun, Jian .
2016 IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2016, :770-778
[8]   Automatic Detection of Cervical Vertebral Landmarks for Fluoroscopic Joint Motion Analysis [J].
Jakobsen, Ida Marie Groth ;
Plocharski, Maciej .
IMAGE ANALYSIS, 2019, 11482 :209-220
[9]   Postoperative 3D spine reconstruction by navigating partitioning manifolds [J].
Kadoury, Samuel ;
Labelle, Hubert ;
Parent, Stefan .
MEDICAL PHYSICS, 2016, 43 (03) :1045-1056
[10]   A Guideline of Selecting and Reporting Intraclass Correlation Coefficients for Reliability Research [J].
Koo, Terry K. ;
Li, Mae Y. .
JOURNAL OF CHIROPRACTIC MEDICINE, 2016, 15 (02) :155-163