Genomic sequencing in clinical trials

被引:18
作者
Mestan, Karen K. [1 ]
Ilkhanoff, Leonard [2 ]
Mouli, Samdeep [3 ]
Lin, Simon [4 ]
机构
[1] Northwestern Univ, Dept Pediat, Div Neonatol, Feinberg Sch Med, Chicago, IL 60611 USA
[2] Northwestern Univ, Dept Med, Div Cardiol, Sect Electrophysiol,Feinberg Sch Med, Chicago, IL 60611 USA
[3] Northwestern Univ, Dept Radiol, Feinberg Sch Med, Chicago, IL 60611 USA
[4] Marshfield Clin Res Fdn, Biomed Informat Res Ctr, Marshfield, WI USA
基金
美国国家卫生研究院;
关键词
Clinical trial; DNA; sequencing; human genome; bioinformatics; MUTATIONS; EXOME; IDENTIFICATION; TRANSCRIPTOME; VPS35;
D O I
10.1186/1479-5876-9-222
中图分类号
R-3 [医学研究方法]; R3 [基础医学];
学科分类号
1001 ;
摘要
Human genome sequencing is the process by which the exact order of nucleic acid base pairs in the 24 human chromosomes is determined. Since the completion of the Human Genome Project in 2003, genomic sequencing is rapidly becoming a major part of our translational research efforts to understand and improve human health and disease. This article reviews the current and future directions of clinical research with respect to genomic sequencing, a technology that is just beginning to find its way into clinical trials both nationally and worldwide. We highlight the currently available types of genomic sequencing platforms, outline the advantages and disadvantages of each, and compare first- and next-generation techniques with respect to capabilities, quality, and cost. We describe the current geographical distributions and types of disease conditions in which these technologies are used, and how next-generation sequencing is strategically being incorporated into new and existing studies. Lastly, recent major breakthroughs and the ongoing challenges of using genomic sequencing in clinical research are discussed.
引用
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页数:10
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