Theoretical and Experimental Study of Valence Photoelectron Spectrum of D,L-Alanine Amino Acid

被引:26
作者
Farrokhpour, H. [1 ]
Fathi, F. [1 ]
Naves De Brito, A. [2 ,3 ]
机构
[1] Isfahan Univ Technol, Dept Chem, Esfahan 8415683111, Iran
[2] LNLS, BR-13084971 Campinas, SP, Brazil
[3] Univ Estadual Campinas, Inst Fis Gleb Wataghin, BR-13083859 Campinas, SP, Brazil
关键词
SYMMETRY-ADAPTED-CLUSTER; WAVE-FUNCTION; SAC-CI; ELECTRONIC-STRUCTURE; EXCITED-STATES; CORE-LEVEL; ALANINE; SPECTROSCOPY; EXPANSION; GLYCINE;
D O I
10.1021/jp3023716
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this work, the He-I (21.218 eV) photoelectron spectrum of D,L-alanine in the gas phase is revisited experimentally and theoretically. To support the experiment, the high level ab initio calculations were used to calculate and assign the photoelectron spectra of the four most stable conformers of gaseous alanine, carefully. The symmetry adapted cluster/configuration interaction (SAC-CI) method based on single and double excitation operators (SD-R) and its more accurate version, termed general-R, was used to separately calculate the energies and intensities of the ionization bands of the L- and n-alanine conformers. The intensities of ionization bands were calculated based on the monopole approximation. Also, natural bonding orbital (NBO) calculations were employed for better spectral band assignment. The relative electronic energy, Gibbs free energy, and Boltzmann population ratio of the conformers were calculated at the experimental temperature (403 K) using several theoretical methods. The theoretical photoelectron spectrum of alanine calculated by summing over the spectra of individual D and L conformers weighted by different population ratios. Finally, the population ratio of the four most stable conformers of alanine was estimated from the experimental photoelectron spectrum using theoretical calculations for the first time.
引用
收藏
页码:7004 / 7015
页数:12
相关论文
共 46 条
[1]   ELECTRONIC-STRUCTURE OF XANTHINE AND ITS BIOLOGICAL METHYL-DERIVATIVES BY UV PHOTOELECTRON-SPECTROSCOPY [J].
AJO, D ;
FRAGALA, I ;
GRANOZZI, G ;
TONDELLO, E .
SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 1978, 34 (12) :1235-1238
[2]  
[Anonymous], REV MODERN QUANTUM C
[3]  
[Anonymous], 1995, NBO VERSION 3 1
[4]   The identification of the two missing conformers of gas-phase alanine: a jet-cooled Raman spectroscopy study [J].
Balabin, Roman M. .
PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 2010, 12 (23) :5980-5982
[5]   DENSITY-FUNCTIONAL THERMOCHEMISTRY .3. THE ROLE OF EXACT EXCHANGE [J].
BECKE, AD .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5648-5652
[6]   The gas-phase structure of alanine [J].
Blanco, S ;
Lesarri, A ;
López, JC ;
Alonso, JL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2004, 126 (37) :11675-11683
[7]   HE(I) AND HE(II) PHOTOELECTRON-SPECTRA OF GLYCINE AND RELATED MOLECULES [J].
CANNINGTON, PH ;
HAM, NS .
JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA, 1983, 32 (02) :139-151
[8]   PHOTOELECTRON-SPECTRA OF AMINO-ACIDS - SURVEY [J].
CANNINGTON, PH ;
HAM, NS .
JOURNAL OF ELECTRON SPECTROSCOPY AND RELATED PHENOMENA, 1979, 15 (JAN) :79-82
[9]   AB-INITIO CONFORMATIONAL-ANALYSIS OF ALANINE [J].
CAO, M ;
NEWTON, SQ ;
PRANATA, J ;
SCHAFER, L .
JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 1995, 332 (03) :251-267
[10]   Conformers of gaseous alpha-alanine [J].
Csaszar, AG .
JOURNAL OF PHYSICAL CHEMISTRY, 1996, 100 (09) :3541-3551