Mixture density networks for the indirect estimation of reference intervals

被引:3
|
作者
Hepp, Tobias [1 ,2 ]
Zierk, Jakob [3 ]
Rauh, Manfred [3 ]
Metzler, Markus [3 ]
Seitz, Sarem [4 ]
机构
[1] Friedrich Alexander Univ Erlangen Nurnberg, Dept Med Informat Biometry & Epidemiol, Waldstr 6, D-91054 Erlangen, Germany
[2] Georg August Univ Gottingen, Chair Spatial Data Sci & Stat Learning, Pl Gottinger Sieben 3, D-37073 Gottingen, Germany
[3] Univ Hosp Erlangen, Dept Pediat & Adolescent Med, Loschgestr 15, D-91054 Erlangen, Germany
[4] Otto Friedrich Univ Bamberg, Dept Informat Syst & Appl Comp Sci, Kapuzinerstr 16, D-96047 Bamberg, Germany
关键词
Mixture density networks; Reference intervals; Latent class regression; Distributional regression; PEDIATRIC REFERENCE INTERVALS; MAXIMUM-LIKELIHOOD;
D O I
10.1186/s12859-022-04846-0
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Background Reference intervals represent the expected range of physiological test results in a healthy population and are essential to support medical decision making. Particularly in the context of pediatric reference intervals, where recruitment regulations make prospective studies challenging to conduct, indirect estimation strategies are becoming increasingly important. Established indirect methods enable robust identification of the distribution of "healthy" samples from laboratory databases, which include unlabeled pathologic cases, but are currently severely limited when adjusting for essential patient characteristics such as age. Here, we propose the use of mixture density networks (MDN) to overcome this problem and model all parameters of the mixture distribution in a single step. Results Estimated reference intervals from varying settings with simulated data demonstrate the ability to accurately estimate latent distributions from unlabeled data using different implementations of MDNs. Comparing the performance with alternative estimation approaches further highlights the importance of modeling the mixture component weights as a function of the input in order to avoid biased estimates for all other parameters and the resulting reference intervals. We also provide a strategy to generate partially customized starting weights to improve proper identification of the latent components. Finally, the application on real-world hemoglobin samples provides results in line with current gold standard approaches, but also suggests further investigations with respect to adequate regularization strategies in order to prevent overfitting the data. Conclusions Mixture density networks provide a promising approach capable of extracting the distribution of healthy samples from unlabeled laboratory databases while simultaneously and explicitly estimating all parameters and component weights as non-linear functions of the covariate(s), thereby allowing the estimation of age-dependent reference intervals in a single step. Further studies on model regularization and asymmetric component distributions are warranted to consolidate our findings and expand the scope of applications.
引用
收藏
页数:17
相关论文
共 50 条
  • [41] Graph Mixture Density Networks
    Errica, Federico
    Bacciu, Davide
    Micheli, Alessio
    INTERNATIONAL CONFERENCE ON MACHINE LEARNING, VOL 139, 2021, 139
  • [42] Regularisation of mixture density networks
    Hjorth, LU
    Nabney, IT
    NINTH INTERNATIONAL CONFERENCE ON ARTIFICIAL NEURAL NETWORKS (ICANN99), VOLS 1 AND 2, 1999, (470): : 521 - 526
  • [43] Survival Mixture Density Networks
    Han, Xintian
    Goldstein, Mark
    Ranganath, Rajesh
    MACHINE LEARNING FOR HEALTHCARE CONFERENCE, VOL 182, 2022, 182 : 224 - 248
  • [44] INDIRECT ESTIMATION OF CLINICAL CHEMICAL REFERENCE INTERVALS FROM TOTAL HOSPITAL PATIENT DATA - APPLICATION OF A MODIFIED BHATTACHARYA PROCEDURE
    BAADENHUIJSEN, H
    SMIT, JC
    JOURNAL OF CLINICAL CHEMISTRY AND CLINICAL BIOCHEMISTRY, 1985, 23 (12): : 829 - 839
  • [45] Establishment of thromboelastography reference intervals by indirect method and relevant factor analyses
    Cheng, Daye
    Li, Xiaoying
    Zhao, Shuo
    Hao Yiwen
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2020, 34 (06)
  • [46] Exponential confidence intervals in nonparametric density estimation
    Bagdasarov, DR
    Ostrovskii, EI
    THEORY OF PROBABILITY AND ITS APPLICATIONS, 1998, 42 (04) : 684 - 688
  • [47] Estimation of individual reference intervals in small sample sizes
    Hansen, Ase Marie
    Garde, Anne Helene
    Eller, Nanna Hurwitz
    INTERNATIONAL JOURNAL OF HYGIENE AND ENVIRONMENTAL HEALTH, 2007, 210 (3-4) : 471 - 478
  • [48] Projection pursuit mixture density estimation
    Aladjem, M
    IEEE TRANSACTIONS ON SIGNAL PROCESSING, 2005, 53 (11) : 4376 - 4383
  • [49] ADAPTIVE MIXTURE DENSITY-ESTIMATION
    PRIEBE, CE
    MARCHETTE, DJ
    PATTERN RECOGNITION, 1993, 26 (05) : 771 - 785
  • [50] A comparison of mixture models for density estimation
    Moerland, P
    NINTH INTERNATIONAL CONFERENCE ON ARTIFICIAL NEURAL NETWORKS (ICANN99), VOLS 1 AND 2, 1999, (470): : 25 - 30