Picosecond thermometer in the amide I band of myoglobin -: art. no. 128101

被引:33
作者
Austin, RH [1 ]
Xie, AH
van der Meer, L
Redlich, B
Lindgård, PA
Frauenfelder, H
Fu, D
机构
[1] Princeton Univ, Dept Phys, Princeton, NJ 08544 USA
[2] Oklahoma State Univ, Dept Phys, Stillwater, OK 74078 USA
[3] FOM, Inst Plasma Phys, Nieuwegein, Netherlands
[4] Riso Natl Lab, Dept Mat Sci, DK-4000 Roskilde, Denmark
[5] Danish Tech Univ, QUP Ctr, DK-2800 Lyngby, Denmark
[6] Los Alamos Natl Lab, Theory Div T10, Los Alamos, NM 87545 USA
[7] Princeton Univ, Dept Chem, Princeton, NJ 08544 USA
关键词
D O I
10.1103/PhysRevLett.94.128101
中图分类号
O4 [物理学];
学科分类号
0702 ;
摘要
The amide I and II bands in myoglobin show a heterogeneous temperature dependence, with bands at 6.17 and 6.43 mu m which are more intense at low temperatures. The amide I band temperature dependence is on the long wavelength edge of the band, while the short wavelength side has almost no temperature dependence. We compare concepts of anharmonic solid-state crystal physics and chemical physics for the origins of these bands. We suggest that the long wavelength side is composed of those amino acids which hydrogen bond to the hydration shell of the protein, and that temperature dependent bands can be used to determine the time it takes vibrational energy to flow into the hydration shell. We determine that vibrational energy flow to the hydration shell from the amide I takes approximately 20 ps to occur.
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页数:4
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共 23 条
[1]   LOCALIZED EXCITATIONS IN HYDROGEN-BONDED MOLECULAR-CRYSTALS [J].
ALEXANDER, DM ;
KRUMHANSL, JA .
PHYSICAL REVIEW B, 1986, 33 (10) :7172-7185
[2]   Picosecond IR dynamics: lessons learned [J].
Austin, R ;
Xie, AH .
NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, 1998, 407 (1-3) :504-508
[3]   DEFECTS IN A NONLINEAR PSEUDO ONE-DIMENSIONAL SOLID [J].
BLANCHET, GB ;
FINCHER, CR .
PHYSICAL REVIEW LETTERS, 1985, 54 (12) :1310-1312
[4]   INFRARED-ABSORPTION IN ACETANILIDE BY SOLITONS [J].
CARERI, G ;
BUONTEMPO, U ;
CARTA, F ;
GRATTON, E ;
SCOTT, AC .
PHYSICAL REVIEW LETTERS, 1983, 51 (04) :304-307
[5]   Vibrational frequency shifts as a probe of hydrogen bonds: thermal expansion and glass transition of myoglobin in mixed solvents [J].
Demmel, F ;
Doster, W ;
Petry, W ;
Schulte, A .
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS, 1997, 26 (04) :327-335
[6]   Self-trapping of the amide I band in a peptide model crystal [J].
Edler, J ;
Hamm, P .
JOURNAL OF CHEMICAL PHYSICS, 2002, 117 (05) :2415-2424
[7]   TEMPERATURE-DEPENDENT X-RAY-DIFFRACTION AS A PROBE OF PROTEIN STRUCTURAL DYNAMICS [J].
FRAUENFELDER, H ;
PETSKO, GA ;
TSERNOGLOU, D .
NATURE, 1979, 280 (5723) :558-563
[8]   The role of structure, energy landscape, dynamics, and allostery in the enzymatic function of myoglobin [J].
Frauenfelder, H ;
McMahon, BH ;
Austin, RH ;
Chu, K ;
Groves, JT .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (05) :2370-2374
[9]   Structure of the amide I band of peptides measured by femtosecond nonlinear-infrared spectroscopy [J].
Hamm, P ;
Lim, MH ;
Hochstrasser, RM .
JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (31) :6123-6138
[10]   Selftrapping, biomolecules and free electron lasers [J].
Lindgård, PA ;
Stoneham, AM .
JOURNAL OF PHYSICS-CONDENSED MATTER, 2003, 15 (18) :V5-V9