Uncovering the Genetic History of the Present-Day Greenlandic Population

被引:75
作者
Moltke, Ida [1 ,2 ]
Fumagalli, Matteo [3 ,4 ]
Korneliussen, Thorfinn S. [5 ]
Crawford, Jacob E. [3 ]
Bjerregaard, Peter [6 ]
Jorgensen, Marit E. [6 ,7 ]
Grarup, Niels [8 ]
Gullov, Hans Christian [9 ]
Linneberg, Allan [10 ,11 ,12 ]
Pedersen, Oluf [8 ]
Hansen, Torben [8 ,13 ]
Nielsen, Rasmus [3 ,14 ]
Albrechtsen, Anders [1 ]
机构
[1] Univ Copenhagen, Dept Biol, Bioinformat Ctr, DK-2200 Copenhagen, Denmark
[2] Univ Chicago, Dept Human Genet, Chicago, IL 60637 USA
[3] Univ Calif Berkeley, Dept Integrat Biol, Berkeley, CA 94720 USA
[4] UCL, UCL Genet Inst, Dept Genet Evolut & Environm, London WC1E 6BT, England
[5] Univ Copenhagen, Ctr GeoGenet, Nat Hist Museum Denmark, DK-1350 Copenhagen, Denmark
[6] Univ Southern Denmark, Natl Inst Publ Hlth, DK-1353 Copenhagen, Denmark
[7] Steno Diabet Ctr, DK-2820 Gentofte, Denmark
[8] Univ Copenhagen, Novo Nordisk Fdn Ctr Basic Metab Res, Sect Metab Genet, Fac Hlth & Med Sci, DK-2100 Copenhagen, Denmark
[9] Natl Museum Denmark, Arctic Ctr Ethnog Collect, DK-1220 Copenhagen, Denmark
[10] Glostrup Univ Hosp, Res Ctr Prevent & Hlth, DK-2600 Glostrup, Denmark
[11] Glostrup Univ Hosp, Dept Clin Expt Res, DK-2600 Glostrup, Denmark
[12] Univ Copenhagen, Dept Clin Med, Fac Hlth & Med Sci, DK-2200 Copenhagen, Denmark
[13] Univ Southern Denmark, Fac Hlth Sci, DK-5000 Odense, Denmark
[14] Univ Calif Berkeley, Dept Stat, Berkeley, CA 94720 USA
基金
英国医学研究理事会;
关键词
ADMIXTURE; INUIT; ANCESTRY; MODEL;
D O I
10.1016/j.ajhg.2014.11.012
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Because of past limitations in samples and genotyping technologies, important questions about the history of the present-day Greenlandic population remain unanswered. In an effort to answer these questions and in general investigate the genetic history of the Greenlandic population, we analyzed similar to 200,000 SNPs from more than 10% of the adult Greenlandic population (n = 4,674). We found that recent gene flow from Europe has had a substantial impact on the population: more than 80% of the Greenlanders have some European ancestry (on average similar to 25% of their genome). However, we also found that the amount of recent European gene flow varies across Greenland and is far smaller in the more historically isolated areas in the north and east and in the small villages in the south. Furthermore, we found that there is substantial population structure in the Inuit genetic component of the Greenlanders and that individuals from the east, west, and north can be distinguished from each other. Moreover, the genetic differences in the Inuit ancestry are consistent with a single colonization wave of the island from north to west to south to east. Although it has been speculated that there has been historical admixture between the Norse Vikings who lived in Greenland for a limited period similar to 600-1,000 years ago and the Inuit, we found no evidence supporting this hypothesis. Similarly, we found no evidence supporting a previously hypothesized admixture event between the Inuit in East Greenland and the Dorset people, who lived in Greenland before the Inuit.
引用
收藏
页码:54 / 69
页数:16
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