Commercial ctDNA Assays for Minimal Residual Disease Detection of Solid Tumors

被引:34
作者
Chen, Kevin [1 ]
Shields, Misty D. [2 ,3 ]
Chauhan, Pradeep S. [1 ]
Ramirez, Ricardo J. [4 ,5 ,6 ]
Harris, Peter K. [1 ]
Reimers, Melissa A. [5 ,6 ,7 ]
Zevallos, Jose P. [4 ,5 ,6 ]
Davis, Andrew A. [5 ,6 ,7 ]
Pellini, Bruna [2 ,3 ]
Chaudhuri, Aadel A. [1 ,5 ,6 ,8 ,9 ,10 ,11 ]
机构
[1] Washington Univ, Sch Med, Dept Radiat Oncol, Div Canc Biol, 4511 Forest Pk Ave, St Louis, MO 63108 USA
[2] Univ S Florida, Morsani Coll Med, Dept Oncol Sci, Tampa, FL 33620 USA
[3] H Lee Moffitt Canc Ctr & Res Inst, Dept Thorac Oncol, 12902 Magnolia Dr, Tampa, FL 33612 USA
[4] Washington Univ, Sch Med, Dept Otolaryngol Head & Neck Surg, St Louis, MO 63110 USA
[5] Barnes Jewish Hosp, Siteman Canc Ctr, St Louis, MO 63110 USA
[6] Washington Univ, Sch Med, St Louis, MO 63130 USA
[7] Washington Univ, Sch Med, Dept Med, Div Med Oncol, 660 S Euclid Ave, St Louis, MO 63110 USA
[8] Washington Univ, Sch Med, Dept Genet, St Louis, MO 63110 USA
[9] Washington Univ, Sch Med, Div Biol & Biomed Sci, St Louis, MO 63130 USA
[10] Washington Univ, Sch Med, Dept Biomed Engn, St Louis, MO 63130 USA
[11] Washington Univ, Dept Comp Sci & Engn, St Louis, MO 63110 USA
关键词
COLORECTAL-CANCER; LIQUID BIOPSIES; MRD DETECTION; DNA ANALYSIS; LUNG-CANCER; SURVIVAL; PLASMA; IMPLEMENTATION; CHEMOTHERAPY; MULTICENTER;
D O I
10.1007/s40291-021-00559-x
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The detection of circulating tumor DNA via liquid biopsy has become an important diagnostic test for patients with cancer. While certain commercial liquid biopsy platforms designed to detect circulating tumor DNA have been approved to guide clinical decisions in advanced solid tumors, the clinical utility of these assays for detecting minimal residual disease after curative-intent treatment of nonmetastatic disease is currently limited. Predicting disease response and relapse has considerable potential for increasing the effective implementation of neoadjuvant and adjuvant therapies. As a result, many companies are rapidly investing in the development of liquid biopsy platforms to detect circulating tumor DNA in the minimal residual disease setting. In this review, we discuss the development and clinical implementation of commercial liquid biopsy platforms for circulating tumor DNA minimal residual disease detection of solid tumors. Here, we aim to highlight the technological features that enable highly sensitive detection of tumor-derived genomic alterations, the factors that differentiate these commercial platforms, and the ongoing trials that seek to increase clinical implementation of liquid biopsies using circulating tumor DNA-based minimal residual disease detection.
引用
收藏
页码:757 / 774
页数:18
相关论文
共 122 条
[1]   Clonal haematopoiesis: a source of biological noise in cell-free DNA analyses [J].
Abbosh, C. ;
Swanton, C. ;
Birkbak, N. J. .
ANNALS OF ONCOLOGY, 2019, 30 (03) :358-359
[2]   Phylogenetic tracking and minimal residual disease detection using ctDNA in early-stage NSCLC: A lung TRACERx study [J].
Abbosh, Chris ;
Frankell, Alexander ;
Garnett, Aaron ;
Harrison, Thomas ;
Weichert, Morgan ;
Licon, Abel ;
Veeriah, Selvaraju ;
Daber, Bob ;
Moreau, Mike ;
Chesh, Adrian ;
Litchfield, Kevin ;
Lim, Emilia ;
Cooke, Daniel ;
Puttick, Clare ;
Al Bakir, Maise ;
Gomes, Fabio ;
Patel, Akshay ;
Manzano, Lizi ;
Huebner, Ariana ;
Carey, Nicolas ;
Riley, Joan ;
Roberts, Paula ;
Druley, Todd ;
Shaw, Jacqui A. ;
McGranahan, Nicholas ;
Jamal-Hanjani, Mariam ;
Birkbak, Nicolai ;
Stahl, Josh ;
Swanton, Charles .
CANCER RESEARCH, 2020, 80 (16)
[3]   Early stage NSCLC - challenges to implementing ctDNA-based screening and MRD detection [J].
Abbosh, Christopher ;
Birkbak, Nicolai J. ;
Swanton, Charles .
NATURE REVIEWS CLINICAL ONCOLOGY, 2018, 15 (09) :577-586
[4]   Phylogenetic ctDNA analysis depicts early-stage lung cancer evolution [J].
Abbosh, Christopher ;
Birkbak, Nicolai J. ;
Wilson, Gareth A. ;
Jamal-Hanjani, Mariam ;
Constantin, Tudor ;
Salari, Raheleh ;
Le Quesne, John ;
Moore, David A. ;
Veeriah, Selvaraju ;
Rosenthal, Rachel ;
Marafioti, Teresa ;
Kirkizlar, Eser ;
Watkins, Thomas B. K. ;
McGranahan, Nicholas ;
Ward, Sophia ;
Martinson, Luke ;
Riley, Joan ;
Fraioli, Francesco ;
Al Bakir, Maise ;
Gronroos, Eva ;
Zambrana, Francisco ;
Endozo, Raymondo ;
Bi, Wenya Linda ;
Fennessy, Fiona M. ;
Sponer, Nicole ;
Johnson, Diana ;
Laycock, Joanne ;
Shafi, Seema ;
Czyzewska-Khan, Justyna ;
Rowan, Andrew ;
Chambers, Tim ;
Matthews, Nik ;
Turajlic, Samra ;
Hiley, Crispin ;
Lee, Siow Ming ;
Forster, Martin D. ;
Ahmad, Tanya ;
Falzon, Mary ;
Borg, Elaine ;
Lawrence, David ;
Hayward, Martin ;
Kolvekar, Shyam ;
Panagiotopoulos, Nikolaos ;
Janes, Sam M. ;
Thakrar, Ricky ;
Ahmed, Asia ;
Blackhall, Fiona ;
Summers, Yvonne ;
Hafez, Dina ;
Naik, Ashwini .
NATURE, 2017, 545 (7655) :446-+
[5]   Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors [J].
Adalsteinsson, Viktor A. ;
Ha, Gavin ;
Freeman, Samuel S. ;
Choudhury, Atish D. ;
Stover, Daniel G. ;
Parsons, Heather A. ;
Gydush, Gregory ;
Reed, Sarah C. ;
Rotem, Denisse ;
Rhoades, Justin ;
Loginov, Denis ;
Livitz, Dimitri ;
Rosebrock, Daniel ;
Leshchiner, Ignaty ;
Kim, Jaegil ;
Stewart, Chip ;
Rosenberg, Mara ;
Francis, Joshua M. ;
Zhang, Cheng-Zhong ;
Cohen, Ofir ;
Oh, Coyin ;
Ding, Huiming ;
Polak, Paz ;
Lloyd, Max ;
Mahmud, Sairah ;
Helvie, Karla ;
Merrill, Margaret S. ;
Santiago, Rebecca A. ;
O'Connor, Edward P. ;
Jeong, Seong H. ;
Leeson, Rachel ;
Barry, Rachel M. ;
Kramkowski, Joseph F. ;
Zhang, Zhenwei ;
Polacek, Laura ;
Lohr, Jens G. ;
Schleicher, Molly ;
Lipscomb, Emily ;
Saltzman, Andrea ;
Oliver, Nelly M. ;
Marini, Lori ;
Waks, Adrienne G. ;
Harshman, Lauren C. ;
Tolaney, Sara M. ;
Van Allen, Eliezer M. ;
Winer, Eric P. ;
Lin, Nancy U. ;
Nakabayashi, Mari ;
Taplin, Mary-Ellen ;
Johannessen, Cory M. .
NATURE COMMUNICATIONS, 2017, 8
[6]  
American Cancer Society, 2021, Key Statistics for Cervical Cancer
[7]   Alpelisib for PIK3CA-Mutated, Hormone Receptor-Positive Advanced Breast Cancer [J].
Andre, Fabrice ;
Ciruelos, Eva ;
Rubovszky, Gabor ;
Campone, Mario ;
Loibl, Sibylle ;
Rugo, Hope S. ;
Iwata, Hiroji ;
Conte, Pierfranco ;
Mayer, Ingrid A. ;
Kaufman, Bella ;
Yamashita, Toshinari ;
Lu, Yen-Shen ;
Inoue, Kenichi ;
Takahashi, Masato ;
Papai, Zsuzsanna ;
Longin, Anne-Sophie ;
Mills, David ;
Wilke, Celine ;
Hirawat, Samit ;
Juric, Dejan .
NEW ENGLAND JOURNAL OF MEDICINE, 2019, 380 (20) :1929-1940
[8]  
[Anonymous], 2013, Electronic Source Data in Clinical Investigations
[9]  
Artieri C, 2020, J CLIN ONCOL, V38
[10]  
AstraZeneca, 2020, ASTRAZENECA COLL ARC