The first report about genetic diversity analysis among endemic wild rhubarb (Rheum ribes L.) populations through iPBS markers

被引:9
作者
Erdinc, Ceknas [1 ]
Ekincialp, Aytekin [2 ]
Turan, Sibel [1 ,3 ]
Kocak, Metin [1 ]
Baloc, Faheem Shahzad [4 ]
Sensoy, Suat [5 ]
机构
[1] Van Yuzuncu Yil Univ, Fac Agr, Dept Agr Biotechnol, Van, Turkey
[2] Van Yuzuncu Yil Univ, Baskale Vocat Sch, Van, Turkey
[3] Erciyes Univ, Fac Agr, Dept Agr Biotechnol, Kayseri, Turkey
[4] Sivas Univ Sci & Technol, Fac Agr Sci & Technol, Dept Plant Protect, Sivas, Turkey
[5] Van Yuzuncu Yil Univ, Fac Agr, Hort Dept, Van, Turkey
关键词
iPBS; genetic variation; population structure; Rheum ribes L; wild rhubarb; LAKE VAN BASIN; RETROTRANSPOSON MARKERS; ISSR; GERMPLASM; GENOTYPES; TURKEY; UTILITY; RAPD;
D O I
10.3906/tar-2102-12
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
Approximately 30% of plant species of Turkey, which is among the richest countries in terms of biodiversity, has been endemic. Wild rhubarb (Rheum ribes L.) is a wild vegetable grows especially in the eastern region of Turkey and is an endemic species. In this study, genetic relationships among 80 wild rhubarb genotypes collected from some regions of Lake Van Basin, which are in the distribution area, were tried to be determined by iPBS marker system. At the same time, a commercial variety of R. rhabarbarum, which is a cultivated species, was used as control. PCR studies were conducted with 23 iPBS primers to determine genetic relationships, and a total of 340 scorable bands were obtained. 100% polymorphism rate was obtained from all primers studied. While the average PIC value was found to be 0.90, the highest value was found to be 0.97 from the primer # 2220. It was determined that the genotypes were divided into 3 basic groups in the dendogram created with UPGMA based on Jaccard similarity coefficient.
引用
收藏
页码:784 / 796
页数:13
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