Genomic attributes and recent advances in detection of white spot syndrome virus in shrimp: a review

被引:6
作者
Hossain, Md Nazmul [1 ,3 ]
Chowdhury, Tanjia Afrin [1 ,3 ]
Hasan, Mahmudul [2 ,3 ]
Azim, Kazi Faizul [1 ,7 ]
Jenny, Sayadatunnasa [4 ]
Rabbee, Muhammad Fazle [5 ]
Rahman, Md Mahbubur [6 ]
Somana, Saneya Risa [3 ]
机构
[1] Sylhet Agr Univ, Fac Biotechnol & Genet Engn, Dept Microbial Biotechnol, Sylhet 3100, Bangladesh
[2] Sylhet Agr Univ, Fac Biotechnol & Genet Engn, Dept Pharmaceut & Ind Biotechnol, Sylhet, Bangladesh
[3] Sylhet Agr Univ, Fac Biotechnol & Genet Engn, Sylhet 3100, Bangladesh
[4] Sylhet Agr Univ, Fac Fisheries, Dept Fish Biol & Genet, Sylhet, Bangladesh
[5] Yeungnam Univ, Dept Biotechnol, Gyeongbuk, South Korea
[6] Bangabandhu Sheikh Mujibur Rahman Agr Univ, Inst Biotechnol & Genet Engn, Gazipur, Bangladesh
[7] Univ Tours, Dept Pharm, Tours, France
关键词
WSSV; genomic variation; OIE; molecular detection; immuno-based detection; MEDIATED ISOTHERMAL AMPLIFICATION; MAJOR ENVELOPE PROTEINS; LITOPENAEUS-VANNAMEI; PENAEUS-MONODON; MONOCLONAL-ANTIBODIES; GENETIC-VARIATION; WSSV INFECTION; SENSITIVE DETECTION; ENDOGENOUS VIRUSES; PROTEOMIC ANALYSIS;
D O I
10.1080/17451000.2021.2023191
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
White spot syndrome virus (WSSV) is one of the most devastating shrimp pathogens that causes a potential loss in penaeid shrimp farming. White spot syndrome (WSS) was considered as epizootic in the major shrimp farming nations and currently, no approved medications are available to prevent the infection. Owing to the scientific progress made in the recent decades, it has been possible to identify the genomic mutations and variations of WSSV of distinctive geographic regions. Due to the scarcity of appropriate therapeutics against WSSV, it is crucial to mitigate the risk of infection through early detection of the virus by exploiting suitable diagnostic tools. Also, while ample diagnostic approaches are in use, literature with detailed and updated information is quite limited. The genomic variations in specific loci of WSSV discussed in this review would help in understanding the genomic evolution respective to several lineages of the virus.
引用
收藏
页码:794 / 814
页数:21
相关论文
共 169 条
[1]  
Aktar S, 2020, J FISH, V8, P885, DOI 10.17017/j.fish.230
[2]   Monoclonal antibodies developed for sensitive detection and comparison of white spot syndrome virus isolates in India [J].
Anil, TM ;
Shankar, KM ;
Mohan, CV .
DISEASES OF AQUATIC ORGANISMS, 2002, 51 (01) :67-75
[3]  
Arabit PMT, 2015, DEV SIMPLE RAPID COS
[4]   Formin-binding proteins: Modulators of formin-dependent actin polymerization [J].
Aspenstrom, Pontus .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH, 2010, 1803 (02) :174-182
[5]   Prevalence of white spot syndrome virus infection detected by one-step and nested PCR in selected tiger shrimp (Penaeus monodon) hatcheries [J].
Ayub, Farhana ;
Sarker, Md Yusuf ;
Alam, Md Samsul .
AQUACULTURE INTERNATIONAL, 2008, 16 (05) :405-415
[6]   Semiquantitative dot-blot immunogold assay for specific detection of white spot syndrome virus [J].
Bunsanong, Nittaya ;
Chotigeat, Wilaiwan ;
Deachamag, Panchalika ;
Thananimit, Suchera .
BIOTECHNOLOGY AND APPLIED BIOCHEMISTRY, 2018, 65 (04) :586-593
[7]   Analysis of the Complete Nucleotide Sequence of a White Spot Syndrome Virus Isolated from Pacific White Shrimp [J].
Chai, Choong Yee ;
Yoon, Jangmi ;
Lee, Yong Seok ;
Kim, Young Bong ;
Choi, Tae-Jin .
JOURNAL OF MICROBIOLOGY, 2013, 51 (05) :695-699
[8]   Potential application of CRISPR-Cas12a fluorescence assay coupled with rapid nucleic acid amplification for detection of white spot syndrome virus in shrimp [J].
Chaijarasphong, Thawatchai ;
Thammachai, Thanyawit ;
Itsathitphaisarn, Ornchuma ;
Sritunyalucksana, Kallaya ;
Suebsing, Rungkarn .
AQUACULTURE, 2019, 512
[9]   Development of a polyclonal antibody specific to VP19 envelope protein of white spot syndrome virus (WSSV) using a recombinant protein preparation [J].
Chaivisuthangkura, P ;
Phattanapaijitkul, P ;
Thammapalerd, N ;
Rukpratanporn, S ;
Longyant, S ;
Sithigorngul, W ;
Sithigorngul, P .
JOURNAL OF VIROLOGICAL METHODS, 2006, 133 (02) :180-184
[10]   Identification of white spot syndrome associated baculovirus (WSBV) target organs in the shrimp Penaeus monodon by in situ hybridization [J].
Chang, PS ;
Lo, CF ;
Wang, YC ;
Kou, GH .
DISEASES OF AQUATIC ORGANISMS, 1996, 27 (02) :131-139