BK polyomavirus diversity-Why viral variation matters

被引:29
作者
Blackard, Jason T. [1 ]
Davies, Stella M. [2 ,3 ]
Laskin, Benjamin L. [4 ]
机构
[1] Univ Cincinnati, Coll Med, Div Digest Dis, ML 0595,231 Albert Sabin Way, Cincinnati, OH 45267 USA
[2] Univ Cincinnati, Coll Med, Div Bone Marrow Transplantat & Immune Deficiency, Cincinnati Childrens Hosp Med Ctr, Cincinnati, OH 45267 USA
[3] Univ Cincinnati, Coll Med, Dept Pediat, Cincinnati, OH 45267 USA
[4] Univ Penn, Childrens Hosp Philadelphia, Perelman Sch Med, Div Nephrol, Philadelphia, PA 19104 USA
关键词
BK polyomavirus; BK virus; diversity; variation; evolution; HEPATITIS-C VIRUS; LONG TERMINAL REPEAT; NONCODING CONTROL REGION; RENAL-TRANSPLANT PATIENTS; DEPENDENT RNA-POLYMERASE; LARGE-T-ANTIGEN; CCAAT/ENHANCER BINDING-PROTEIN; HYPERVARIABLE REGION; SEQUENCE VARIATION; IN-VIVO;
D O I
10.1002/rmv.2102
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
BK polyomavirus (BKPyV or BKV) is a non-enveloped, circular double-stranded DNA virus that may exceed 80% seroprevalence in adults. BKV infection typically occurs during childhood, and the majority of adults are latently infected. While BKV infection is rarely associated with clinical disease in most individuals, in immunosuppressed individuals, reactivation may cause kidney (BK-associated nephropathy) or bladder (hemorrhagic cystitis and ureteral stenosis) injury. No antiviral therapies have been approved for the treatment of BKV infection. Reducing immunosuppression is the most effective therapy, although this is not feasible in many patients. Thus, a robust understanding of viral pathogenesis and viral diversity remains important for the development of future therapeutic strategies. Studies of BKV diversity are quite sparse compared to other common viral infections; thus, much of our understanding of BVK variability and evolution relies heavily analogous studies of other viruses such as HIV or viral hepatitis. We provide a comprehensive review of BKV diversity at the population and individual level with careful consideration of how viral variability may impact viral replication, pathogenesis, tropism, and protein function. We also discuss a number of outstanding questions related to BK virus diversity that should be explored rigorously in future studies.
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页数:10
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共 117 条
[1]   DISTINCT HIV-1 LONG TERMINAL REPEAT QUASI-SPECIES PRESENT IN NERVOUS TISSUES COMPARED TO THAT IN LUNG, BLOOD AND LYMPHOID-TISSUES OF AN AIDS PATIENT [J].
AITKHALED, M ;
MCLAUGHLIN, JE ;
JOHNSON, MA ;
EMERY, VC .
AIDS, 1995, 9 (07) :675-683
[2]   Novel Human Polyomavirus Noncoding Control Regions Differ in Bidirectional Gene Expression according to Host Cell, Large T-Antigen Expression, and Clinically Occurring Rearrangements [J].
Ajuh, Elvis T. ;
Wu, Zongsong ;
Kraus, Emma ;
Weissbach, Fabian H. ;
Bethge, Tobias ;
Gosert, Rainer ;
Fischer, Nicole ;
Hirsch, Hans H. .
JOURNAL OF VIROLOGY, 2018, 92 (07)
[3]   GENETIC AND STRUCTURAL-ANALYSIS OF A VIRULENCE DETERMINANT IN POLYOMAVIRUS VP1 [J].
BAUER, PH ;
BRONSON, RT ;
FUNG, SC ;
FREUND, R ;
STEHLE, T ;
HARRISON, SC ;
BENJAMIN, TL .
JOURNAL OF VIROLOGY, 1995, 69 (12) :7925-7931
[4]   Downregulation of the stress-induced ligand ULBP1 following SV40 infection confers viral evasion from NK cell cytotoxicity [J].
Bauman, Yoav ;
Drayman, Nir ;
Ben-Nun-Shaul, Orly ;
Vitenstein, Alon ;
Yamin, Rachel ;
Ophir, Yael ;
Oppenheim, Ariella ;
Mandelboim, Ofer .
ONCOTARGET, 2016, 7 (13) :15369-15381
[5]   MicroRNA based immunoevasion mechanism of human polyomaviruses [J].
Bauman, Yoav ;
Mandelboim, Ofer .
RNA BIOLOGY, 2011, 8 (04) :591-594
[6]   An Identical miRNA of the Human JC and BK Polyoma Viruses Targets the Stress-Induced Ligand ULBP3 to Escape Immune Elimination [J].
Bauman, Yoav ;
Nachmani, Daphna ;
Vitenshtein, Alon ;
Tsukerman, Pinchas ;
Drayman, Nir ;
Stern-Ginossar, Noam ;
Lankry, Dikla ;
Gruda, Raizy ;
Mandelboim, Ofer .
CELL HOST & MICROBE, 2011, 9 (02) :93-102
[7]   Detection of BK virus and JC virus DNA in urine samples from immunocompromised (HIV-infected) and immunocompetent (HIV-non-infected) patients using polymerase chain reaction and microplate hybridisation [J].
Behzad-Behbahani, A ;
Klapper, PE ;
Vallely, PJ ;
Cleator, GM ;
Khoo, SH .
JOURNAL OF CLINICAL VIROLOGY, 2004, 29 (04) :224-229
[8]   Imperfect Symmetry of Sp1 and Core Promoter Sequences Regulates Early and Late Virus Gene Expression of the Bidirectional BK Polyomavirus Noncoding Control Region [J].
Bethge, Tobias ;
Ajuh, Elvis ;
Hirsch, Hans H. .
JOURNAL OF VIROLOGY, 2016, 90 (22) :10083-10101
[9]   Sp1 Sites in the Noncoding Control Region of BK Polyomavirus Are Key Regulators of Bidirectional Viral Early and Late Gene Expression [J].
Bethge, Tobias ;
Hachemi, Helen A. ;
Manzetti, Julia ;
Gosert, Rainer ;
Schaffner, Walter ;
Hirsch, Hans H. .
JOURNAL OF VIROLOGY, 2015, 89 (06) :3396-3411
[10]   Polyomavirus BK-specific cellular immune response to VP1 and large T-antigen in kidney transplant recipients [J].
Binggeli, S. ;
Egli, A. ;
Schaub, S. ;
Binet, I. ;
Mayr, M. ;
Steiger, J. ;
Hirsch, H. H. .
AMERICAN JOURNAL OF TRANSPLANTATION, 2007, 7 (05) :1131-1139