Rapid and direct molecular detection of Streptococcus pneumoniae and Haemophilus influenzae isolated in oropharynx and nasal cavity of children

被引:2
作者
Maleki, A. [1 ]
Mansournia, F. [1 ]
Ghafourian, S. [1 ]
Taherikalani, M. [1 ]
Pakzad, I. [1 ]
Mohammadi, J. [1 ]
Kouhsari, E. [1 ]
Mahmoudi, M. [1 ]
Sadeghifard, N. [1 ]
机构
[1] Ilam Univ Med Sci, Clin Microbiol Res Ctr, Ilam, Iran
关键词
Detection; Haemophilus influenzae; iron uptake; real-time PCR assay; Streptococcus pneumoniae; virulence factors; MICROBIOTA; CARRIAGE;
D O I
10.1016/j.nmni.2019.100632
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
There is a direct correlation between asymptomatic oropharyngeal colonization by pathogenic bacteria and the prevalence of paediatric respiratory infections. Streptococcus pneumoniae and Haemophilus influenzae are common cause of serious bacterial infections such as meningitis in children. This study aimed to monitor healthy children to detect asymptomatic carriers of S. pneumoniae and H. influenzae. In the present cross-sectional study, real-time PCR assay was developed and evaluated in comparison with culture for direct detection of S. pneumoniae and H. influenzae in 123 oropharynx and nasal cavity specimens from healthy children in Ilam, Iran. In addition, virulence factor (ply and hpd) and iron uptake (tbpA and piuA) genes were evaluated by PCR. Our results demonstrated that among all isolates only 14 S. pneumoniae and eight H. influenzae were identified by phenotypic methods, whereas 37 and 21 S. pneumoniae and H. influenzae were identified, respectively, by real-time PCR assay. All S. pneumoniae and H. influenzae isolates possessed tbpA and piuA genes. Also, 81% (30/37) of S. pneumoniae isolates were positive for ply gene, which encoded pneumolysin, as well as 90% (19/21) of H. influenzae isolates were positive for hpd gene. Simultaneous colonization of S. pneumoniae and H. influenzae could indicate the importance of monitoring of healthy children to identification of carriers. (C) 2019 Published by Elsevier Ltd.
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页数:5
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共 18 条
[1]   Interactions between the microbiota and pathogenic bacteria in the gut [J].
Baumler, Andreas J. ;
Sperandio, Vanessa .
NATURE, 2016, 535 (7610) :85-93
[2]   Viral and Bacterial Interactions in the Upper Respiratory Tract [J].
Bosch, Astrid A. T. M. ;
Biesbroek, Giske ;
Trzcinski, Krzysztof ;
Sanders, Elisabeth A. M. ;
Bogaert, Debby .
PLOS PATHOGENS, 2013, 9 (01)
[3]   Emerging pathogenic links between microbiota and the gut-lung axis [J].
Budden, Kurtis F. ;
Gellatly, Shaan L. ;
Wood, David L. A. ;
Cooper, Matthew A. ;
Morrison, Mark ;
Hugenholtz, Philip ;
Hansbro, Philip M. .
NATURE REVIEWS MICROBIOLOGY, 2017, 15 (01) :55-63
[4]   Increased Nasopharyngeal Density and Concurrent Carriage of Streptococcus pneumoniae, Haemophilus influenzae, and Moraxella catarrhalis Are Associated with Pneumonia in Febrile Children [J].
Chochua, Sopio ;
D'Acremont, Valerie ;
Hanke, Christiane ;
Alfa, David ;
Shak, Joshua ;
Kilowoko, Mary ;
Kyungu, Esther ;
Kaiser, Laurent ;
Genton, Blaise ;
Klugman, Keith P. ;
Vidal, Jorge E. .
PLOS ONE, 2016, 11 (12)
[5]   Comparative genome analysis identifies novel nucleic acid diagnostic targets for use in the specific detection of Haemophilus influenzae [J].
Coughlan, Helena ;
Reddington, Kate ;
Tuite, Nina ;
Boo, Teck Wee ;
Cormican, Martin ;
Barrett, Louise ;
Smith, Terry J. ;
Clancy, Eoin ;
Barry, Thomas .
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE, 2015, 83 (02) :112-116
[6]   A duplex real-time PCR for the detection of Streptococcus pneumoniae and Neisseria meningitidis in cerebrospinal fluid [J].
Diawara, Idrissa ;
Katfy, Khalid ;
Zerouali, Khalid ;
Belabbes, Houria ;
Elmdaghri, Naima .
JOURNAL OF INFECTION IN DEVELOPING COUNTRIES, 2016, 10 (01) :53-61
[7]   Impact of nasopharyngeal microbiota on the development of respiratory tract diseases [J].
Esposito, S. ;
Principi, N. .
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES, 2018, 37 (01) :1-7
[8]   A review of studies on the effect of iron deficiency on cognitive development in children [J].
Grantham-McGregor, S ;
Ani, C .
JOURNAL OF NUTRITION, 2001, 131 (02) :649S-666S
[9]   The Role of Influenza and Parainfluenza Infections in Nasopharyngeal Pneumococcal Acquisition Among Young Children [J].
Grijalva, Carlos G. ;
Griffin, Marie R. ;
Edwards, Kathryn M. ;
Williams, John V. ;
Gil, Ana I. ;
Verastegui, Hector ;
Hartinger, Stella M. ;
Vidal, Jorge E. ;
Klugman, Keith P. ;
Lanata, Claudio F. .
CLINICAL INFECTIOUS DISEASES, 2014, 58 (10) :1369-1376
[10]   Pneumolysin plays a key role at the initial step of establishing pneumococcal nasal colonization [J].
Hotomi, Muneki ;
Yuasa, Jun ;
Briles, David E. ;
Yamanaka, Noboru .
FOLIA MICROBIOLOGICA, 2016, 61 (05) :375-383