Untangling the Interplay between Epidemic Spread and Transmission Network Dynamics

被引:49
作者
Kamp, Christel [1 ]
机构
[1] Paul Ehrlich Inst, Fed Inst Vaccines & Biomed, D-6070 Langen, Germany
关键词
HIV-INFECTION; STAGE; DISEASE; PARTNERSHIPS; MODELS; BEHAVIOR; CONTACTS; BRITAIN; DRIVEN;
D O I
10.1371/journal.pcbi.1000984
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The epidemic spread of infectious diseases is ubiquitous and often has a considerable impact on public health and economic wealth. The large variability in the spatio-temporal patterns of epidemics prohibits simple interventions and requires a detailed analysis of each epidemic with respect to its infectious agent and the corresponding routes of transmission. To facilitate this analysis, we introduce a mathematical framework which links epidemic patterns to the topology and dynamics of the underlying transmission network. The evolution, both in disease prevalence and transmission network topology, is derived from a closed set of partial differential equations for infections without allowing for recovery. The predictions are in excellent agreement with complementarily conducted agent-based simulations. The capacity of this new method is demonstrated in several case studies on HIV epidemics in synthetic populations: it allows us to monitor the evolution of contact behavior among healthy and infected individuals and the contributions of different disease stages to the spreading of the epidemic. This gives both direction to and a test bed for targeted intervention strategies for epidemic control. In conclusion, this mathematical framework provides a capable toolbox for the analysis of epidemics from first principles. This allows for fast, in silico modeling - and manipulation - of epidemics and is especially powerful if complemented with adequate empirical data for parameterization.
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页数:9
相关论文
共 64 条
[11]   Mind the gap: The role of time between sex with two consecutive partners on the transmission dynamics of gonorrhea [J].
Chen, Mark I. ;
Ghani, Azra C. ;
Edmunds, John .
SEXUALLY TRANSMITTED DISEASES, 2008, 35 (05) :435-444
[12]   THE EPIDEMIOLOGY OF AIDS - CURRENT STATUS AND FUTURE-PROSPECTS [J].
CURRAN, JW ;
MORGAN, WM ;
HARDY, AM ;
JAFFE, HW ;
DARROW, WW ;
DOWDLE, WR .
SCIENCE, 1985, 229 (4720) :1352-1357
[13]  
DIEKMANN O, 1990, J MATH BIOL, V28, P365
[14]   Modeling dynamic and network heterogeneities in the spread of sexually transmitted diseases [J].
Eames, KTD ;
Keeling, MJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (20) :13330-13335
[15]   Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings [J].
Fraser, Christophe ;
Donnelly, Christl A. ;
Cauchemez, Simon ;
Hanage, William P. ;
Van Kerkhove, Maria D. ;
Hollingsworth, T. Deirdre ;
Griffin, Jamie ;
Baggaley, Rebecca F. ;
Jenkins, Helen E. ;
Lyons, Emily J. ;
Jombart, Thibaut ;
Hinsley, Wes R. ;
Grassly, Nicholas C. ;
Balloux, Francois ;
Ghani, Azra C. ;
Ferguson, Neil M. ;
Rambaut, Andrew ;
Pybus, Oliver G. ;
Lopez-Gatell, Hugo ;
Alpuche-Aranda, Celia M. ;
Bojorquez Chapela, Ietza ;
Palacios Zavala, Ethel ;
Espejo Guevara, Dulce Ma. ;
Checchi, Francesco ;
Garcia, Erika ;
Hugonnet, Stephane ;
Roth, Cathy .
SCIENCE, 2009, 324 (5934) :1557-1561
[16]  
FUNK S, 2010, J R SOC INT IN PRESS
[17]   The spread of awareness and its impact on epidemic outbreaks [J].
Funk, Sebastian ;
Gilad, Erez ;
Watkins, Chris ;
Jansen, Vincent A. A. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2009, 106 (16) :6872-6877
[18]   Community structure in social and biological networks [J].
Girvan, M ;
Newman, MEJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (12) :7821-7826
[19]   Epidemic dynamics on an adaptive network [J].
Gross, Thilo ;
D'Lima, Carlos J. Dommar ;
Blasius, Bernd .
PHYSICAL REVIEW LETTERS, 2006, 96 (20)
[20]   The mathematics of infectious diseases [J].
Hethcote, HW .
SIAM REVIEW, 2000, 42 (04) :599-653