Mass spectrometry informs the structure and dynamics of membrane proteins involved in lipid and drug transport

被引:12
作者
Bolla, Jani R. [1 ,2 ]
Fiorentino, Francesco [1 ,2 ]
V. Robinson, Carol [1 ,2 ]
机构
[1] Univ Oxford, Dept Chem, Phys & Theoret Chem Lab, Oxford OX1 3QZ, England
[2] Kavli Inst Nanosci Discovery, 3 South Parks Rd, Oxford OX1 3QU, England
基金
英国医学研究理事会;
关键词
OUTER-MEMBRANE; LIPOPOLYSACCHARIDE TRANSPORT; EFFLUX PUMPS; CRYO-EM; RESISTANCE; TRANSLOCATION; IDENTIFY; MSBA;
D O I
10.1016/j.sbi.2021.03.014
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Membrane proteins are important macromolecules that play crucial roles in many cellular and physiological processes. Over the past two decades, the use of mass spectrometry as a biophysical tool to characterise membrane proteins has grown steadily. By capturing these dynamic complexes in the gas phase, many unknown small molecule interactions have been revealed. One particular application of this research has been the focus on antibiotic resistance with considerable efforts being made to understand underlying mechanisms. Here we review recent advances in the application of mass spectrometry that have yielded both structural and dynamic information on the interactions of antibiotics with proteins involved in bacterial cell envelope biogenesis and drug efflux.
引用
收藏
页码:53 / 60
页数:8
相关论文
共 65 条
[1]   Structural mass spectrometry comes of age: new insight into protein structure, function and interactions [J].
Allison, Timothy M. ;
Bechara, Cherine .
BIOCHEMICAL SOCIETY TRANSACTIONS, 2019, 47 :317-327
[2]   A Peptidomimetic Antibiotic Interacts with the Periplasmic Domain of LptD from Pseudomonas aeruginosa [J].
Andolina, Gloria ;
Bencze, Laszlo-Csaba ;
Zerbe, Katja ;
Mueller, Maik ;
Steinmann, Jessica ;
Kocherla, Harsha ;
Mondal, Milon ;
Sobek, Jens ;
Moehle, Kerstin ;
Malojcic, Goran ;
Wollscheid, Bernd ;
Robinson, John A. .
ACS CHEMICAL BIOLOGY, 2018, 13 (03) :666-675
[3]   Computational analysis of membrane proteins: the largest class of drug targets [J].
Arinaminpathy, Yalini ;
Khurana, Ekta ;
Engelman, Donald M. ;
Gerstein, Mark B. .
DRUG DISCOVERY TODAY, 2009, 14 (23-24) :1130-1135
[4]   AcrB drug-binding pocket substitution confers clinically relevant resistance and altered substrate specificity [J].
Blair, Jessica M. A. ;
Bavro, Vassiliy N. ;
Ricci, Vito ;
Modi, Niraj ;
Cacciotto, Pierpaolo ;
Kleinekathoefer, Ulrich ;
Ruggerone, Paolo ;
Vargiu, Attilio V. ;
Baylay, Alison J. ;
Smith, Helen E. ;
Brandon, Yvonne ;
Galloway, David ;
Piddock, Laura J. V. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2015, 112 (11) :3511-3516
[5]   Assembly and regulation of the chlorhexidine-specific efflux pump AceI [J].
Bolla, Jani Reddy ;
Howes, Anna C. ;
Fiorentino, Francesco ;
Robinson, Carol V. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2020, 117 (29) :17011-17018
[6]   Membrane Protein-Lipid Interactions Probed Using Mass Spectrometry [J].
Bolla, Jani Reddy ;
Agasid, Mark T. ;
Mehmood, Shahid ;
Robinson, Carol V. .
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 88, 2019, 88 :85-111
[7]   Mass spectrometry-enabled structural biology of membrane proteins [J].
Calabrese, Antonio N. ;
Radford, Sheena E. .
METHODS, 2018, 147 :187-205
[8]   Single-Particle Cryo-EM at Crystallographic Resolution [J].
Cheng, Yifan .
CELL, 2015, 161 (03) :450-457
[9]   The role played by drug efflux pumps in bacterial multidrug resistance [J].
Chitsaz, Mohsen ;
Brown, Melissa H. .
ANTIMICROBIAL RESISTANCE, 2017, 61 (01) :127-139
[10]   Protein assemblies ejected directly from native membranes yield complexes for mass spectrometry [J].
Chorev, Dror S. ;
Baker, Lindsay A. ;
Wu, Di ;
Beilsten-Edmands, Victoria ;
Rouse, Sarah L. ;
Zeev-Ben-Mordehai, Tzviya ;
Jiko, Chimari ;
Samsudin, Firdaus ;
Gerle, Christoph ;
Khalid, Syma ;
Stewart, Alastair G. ;
Matthews, Stephen J. ;
Gruenewald, Kay ;
Robinson, Carol V. .
SCIENCE, 2018, 362 (6416) :829-+